Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0011 ATGAATGCGTCCGCTTCAAATTCAGGCACTTCTTGTACAATGTCTTCGTCTACAATGATCATTTCTGCTGATACAGCAGAGCCTTCTCCGCTTGATTCAGTTCCCACCTCGGCCGTCAATGGTTCTGCTACCTCTCCTTTGAACAGTGACCAAAACCCACCTCACTCATCCGCATCTTTGTCCCCGCCTCCAGAACTCGAACTACCTGTATCGTGGCCCCAGGATGGAAAGCTTAGTCTCGATTGGATCTATAATCTTATGGCTTGCTTCGACTGGTCTTCCAAGAACCTCTCCCCTTCTGAATTTCCTTGTGTTTTCCCGGTCCATGTCTTCGACTCTCTCATCCTTGTGGCTTCCAAAATGCTTCACAAAGAACCTAACTGTGTATCTGTAGACCCCTTTCAACCCAATTCTGACTCCCGGGACCGAGCTGCTTCCGCAGTTGTCGTTGTGGGGGACGTTCACGGCCAATTGCATGATCTATTGTTCCTCCTTAGGGATGCTGGTTATCCTTCTCAAAATCGCATATTCGTCTTCAATGGGGATTATGTTGATAGAGGAGCTTGGGGTCTGGAAACTTTCTTACTCTTGTTAGCGTGGAAGGTGTTTATGCCGCATAATGTGTATTTACTGCGTGGGAATCACGAATCAAAATACTGTACATCTGTTTATGGCTTTGAGAAGGAAGTTATGGCAAAGTACAGTGATAAAGGTAAGCATGTATATCGGAAATGTTTGGGATGCTTTGAAGGTCTTCCTTTGGCATCTATTATAGCTGGACGTGTATACACAGCTCATGGAGGACTTTTCCGCAGTGTATCTGTGACTCCATCGAAGAGATTAAAAGGAAAGAGGAACCGTAAGAATTATTCCATCCCTGATAATAAAACCTTGTCTCTTGGTTCGTTGGAAGAATTATCTAAAGCTCGGCGATCAGTTCTTGATCCTCCTTGGGAAGGTTCAAACCTGATTCCTGGCGATGTTTTGTGGTCTGATCCTTCGCAAACTCCTGGCCTTTCTCCGAACAAAGAAAGAGGCATTGGCTTATTGTGGGGTCCTGATTGTACTGAGGAATTCTTGAAGAAGTATCAACTAAAGTTTATCATCAGGTCACATGAAGGTCCTGATGCGAGAGAAAAGAGGGATGGTTTTGATGGAATGGATGAAGGTTACACTATCGATCATATTGTGGACTCTGGAAAGATGATCACCCTTTTCAGTGCTCCAGATTACCCACAGTTTCAGGCAACAGATGACAGGTATAATAACAAAGGCGCTTATGTTGTCCTTGAACCCCCGCATTTTGACAATCCAGTATTTCATTGCTTTGAAGCAGTTATACCAAGGCCCAAGGTGAATGCTTATTATGATTATGAAGAGGTGATAAACTCGGATGAAGAATTGGACTTGGCATCCATGGTGACTGCCTGA 1431 0.4451 MNASASNSGTSCTMSSSTMIISADTAEPSPLDSVPTSAVNGSATSPLNSDQNPPHSSASLSPPPELELPVSWPQDGKLSLDWIYNLMACFDWSSKNLSPSEFPCVFPVHVFDSLILVASKMLHKEPNCVSVDPFQPNSDSRDRAASAVVVVGDVHGQLHDLLFLLRDAGYPSQNRIFVFNGDYVDRGAWGLETFLLLLAWKVFMPHNVYLLRGNHESKYCTSVYGFEKEVMAKYSDKGKHVYRKCLGCFEGLPLASIIAGRVYTAHGGLFRSVSVTPSKRLKGKRNRKNYSIPDNKTLSLGSLEELSKARRSVLDPPWEGSNLIPGDVLWSDPSQTPGLSPNKERGIGLLWGPDCTEEFLKKYQLKFIIRSHEGPDAREKRDGFDGMDEGYTIDHIVDSGKMITLFSAPDYPQFQATDDRYNNKGAYVVLEPPHFDNPVFHCFEAVIPRPKVNAYYDYEEVINSDEELDLASMVTA 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0011 476 ProSitePatterns Serine/threonine specific protein phosphatases signature. 211 216 IPR006186 GO:0016787
Prci10g0011 476 PRINTS Serine/threonine phosphatase family signature 147 174 IPR006186 GO:0016787
Prci10g0011 476 PRINTS Serine/threonine phosphatase family signature 247 273 IPR006186 GO:0016787
Prci10g0011 476 PRINTS Serine/threonine phosphatase family signature 177 204 IPR006186 GO:0016787
Prci10g0011 476 PRINTS Serine/threonine phosphatase family signature 210 234 IPR006186 GO:0016787
Prci10g0011 476 PRINTS Serine/threonine phosphatase family signature 307 334 IPR006186 GO:0016787
Prci10g0011 476 PRINTS Serine/threonine phosphatase family signature 401 417 IPR006186 GO:0016787
Prci10g0011 476 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 52 473 - -
Prci10g0011 476 Gene3D - 104 474 IPR029052 -
Prci10g0011 476 CDD MPP_PP7 72 457 IPR041754 -
Prci10g0011 476 SMART pp2a_7 106 450 IPR006186 GO:0016787
Prci10g0011 476 FunFam Serine/threonine-protein phosphatase 90 471 - -
Prci10g0011 476 MobiDBLite consensus disorder prediction 23 68 - -
Prci10g0011 476 Pfam Calcineurin-like phosphoesterase 148 375 IPR004843 GO:0016787
Prci10g0011 476 SUPERFAMILY Metallo-dependent phosphatases 101 451 IPR029052 -
Prci10g0011 476 MobiDBLite consensus disorder prediction 23 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0011 Prci-Chr10 79508 90210 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0011 69 366 Calmodulin-binding Proteins AT5G63870 70.569 1.66e-158 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0011 K04460 - qsa:O6P43_024986 736.102