Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0001 ATGGCGGCAGCGGGTGGAGACACGTGGAAGGCTCATTTGGCTATGGCGTTGACGCAGATACTCTATGGAGGCTACCACGTTATCACCAAGTTGGCGCTCAACGACGGGATCAATCAGTTAGTCTTCTGCCTCTTCCGCGACCTTATTGCTCTTGTTTTTCTGGCCCCCATCGCTATTTTTCGTGAAAAACAGACGCGACCGCCCTTGACTGTGCGACTCCTTTTGTCGTTCTTCTTTCTAGGCTTAACAGGGATATTTGGCAACCAGATTTTGTTTCTTCTTGGTTTAAGCTATACTAATCCAACTTATGCTGCTGCCACGCAACCTGCCATTCCAGTCTTCACATTTCTTTTGAGTGTGATGATGGGTACAGAAAGAGTAAGCTTACTTAGATATGAAGGCCTAGCAAAGGTTGGAGGAACTTGTGTCTGTGTTTCAGGTGCCATATTTATGGCTTTGTGTCGTGGTCCTGCACTCATTGGTTACAAAGAAACAGATATCATAGCAGAAAGTGAGGTATTTGCTAAAGGTCAACTTGACTCATCTGGATGGTCGATTGGTGGTTTGCTGGGCATTGGGTTAGACCAATTTCACATTGGACTTATGTGCTTGATAGGAAACTGCATTTGCATGGCTGCTTTTATAGCCATCCAGGCTCCTGTGTTAGTAAAGTATCCTGCCAACATATCTGTAACAGCATATTCTTATTTATTTGGAGCTATTCCGATGGTGATAACAGCATTCTTCACGACTAATAAGTCAAATGATTGGAGATTGACAGAATCAGAAATATTTGCTGTTATTTATGCTGGAGCAATTACTTCTGCCCTTTGTTATGGGCTTTTGACATGGTCCAATAAGATCTTGGGGCCAGCTATGGTTGCCCTTTATTATCCAGTTCAGCCAGTAGCTTCTGCCCTCTTGTCACAAATTTTCCTTGGGAGTCCAATTTATTTAGGAAGTGTCGTGGGGGGATGTTTGATAGTTGCTGGACTGTATATGGTTACTTGGGCATCTTCTAGAGAAAGACAGGCAACTCCCTGGGCCATTCCTCACGATCCCCATGTCTCATGGGTCTCTGAGCCGTTCATTCATAGAGATGATCTGCTCAACAGGAATTCCACTTCGAGAGATGTATCACCAAAGCCTTCAGATTAA 1158 0.443 MAAAGGDTWKAHLAMALTQILYGGYHVITKLALNDGINQLVFCLFRDLIALVFLAPIAIFREKQTRPPLTVRLLLSFFFLGLTGIFGNQILFLLGLSYTNPTYAAATQPAIPVFTFLLSVMMGTERVSLLRYEGLAKVGGTCVCVSGAIFMALCRGPALIGYKETDIIAESEVFAKGQLDSSGWSIGGLLGIGLDQFHIGLMCLIGNCICMAAFIAIQAPVLVKYPANISVTAYSYLFGAIPMVITAFFTTNKSNDWRLTESEIFAVIYAGAITSALCYGLLTWSNKILGPAMVALYYPVQPVASALLSQIFLGSPIYLGSVVGGCLIVAGLYMVTWASSRERQATPWAIPHDPHVSWVSEPFIHRDDLLNRNSTSRDVSPKPSD 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0001 385 Pfam EamA-like transporter family 11 136 IPR000620 GO:0016020
Prci10g0001 385 Pfam EamA-like transporter family 199 336 IPR000620 GO:0016020
Prci10g0001 385 PANTHER WAT1-RELATED PROTEIN 13 343 IPR030184 GO:0016020|GO:0022857
Prci10g0001 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 138 - -
Prci10g0001 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0001 Prci-Chr10 5295 18613 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0001 94 368 Nodulin-like Gene Family AT5G45370 62.816 2.09e-119 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0001 - - gmx:100787738 526.554