Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci109g0002 ATGGTTCAAAGGAAGGTACCCTGCAAGCTTGGTATCCAAGCTGATCATCATGTTAAATCTGATAAGCGCTTGGCAAAAAACTTGAACCAAGATGGGAAAACCAGAGGAGGAGCTGATATGAAGAAGAAAATGAAGAAGTCAAGGTCTATTAGGCTTTCTGATATGGAGATTCTCAGATCATCACCACCTTCAAAGAAGAGCTTCTCTCAACCAGAAAAGCCTTCTTCTTTTGTTCAAGTTTCTCATTCTGTATCATCGTCTTCTCCACAGAAGCTGACACCTTTGATCAGAACAAGTGATGGGTCACCCAATTACATGAAGCCCACAAGCAGTTCAGATGCAAAGAAGGAGCTTTTCCCATTGAGTCTTCGAAACTCCAAATCTAACTCAAAGTCTAGCTCTAGCTCTGTTTCTGCTAATAAGCCTGCAAAAACTTTGGCAAAGTCATCACCTAGTTTGAGGCTTGTGAGAACCTTAACGAAGACTCCAAGTTTCAAGAAATCCTCTAGAGTTTCTCTTTGTGCTGATATGAATGCTCAGAGAGGTACCTGTTCTTCAACTTTGAAGGACTCAAAGTTTCCTCCTTACCTGATGCTTAACCCTGGGGCCACTGAGTCTGAAGGCACTTCAGTTATGAAGGTTTGCCCATACACCTATTGTTCTCTGAATGGTCATCGTCATGCTCCTTTGCCTCCATTGAAGAGCTTCTTGTCTGCAAGGAGACATTTGAAGACTCAGAAGAGTATGAAGCTGGAAGCTCTTAGCCCTCGGAGGTTGAAGGTACCCTGCGAGCCAAAGAAGGAATCTGATACTTATGTGGATTTCTTCATCGAAATCTATGCTAAGAAAAATGGGGGTGAAGAAGAAATCAGATGCATGGGCTCCGCCAGAAGATTTGAGGATGAAGAAAACATCAAATCTACAATGGAGGAGAATAACTTGAAGGCACAAGGAGATGATGTTATGAAGCAAGTTGATGCAAGCCTGTCTGATGGATCTCCAAAGTCTGAGATAGATTCGGAAGAGGATTATGGAAAGTGCTTTGATGATGCTAAGATTGAAGCAGATTTGAAGGGGAGCTTTCTTCAAGAACAAGAAGCCGAATTTGCAGATGAAAAGCCCTTATCTATCGGGTCTGGTGAAGAAATAAGCATTGAAAGCTGCTGCAGTGAGGTTAGCTATGAAGGAGAAATGGGTGATTCTAATTCTGAAGCTTCCGATATGGAGTGGGAGCATGAAAAGGATGATGTTGATTCTTCTGTTCTCACAGAGGAGAATGATTCAAAAGTTGAATCTTTATCTGAGAGTTCAAATGATGTTTCTGTGGTGTGGTTAGATGGCATCATTAACATCTATTATGAGGATATTGTTGCTGAAGTTTCCCAAGAATCTAACACCAAAGAAAGGTTCTGTATTGAATCACAACATCATGGGATCAATTGTGATTTGGAAGGGACGCATGAAAGCTTGGAGACTCAAGAACCTAGTAAGTCACAAGAACAAGTGAATTGTGAGCAATCTTTTTTGGCTAAGAAAGTGTGGGAGGAATTGACAGACACAGAAGGAAACTGTGGAGGAAATGAAACAGTCATGGATGCCACAGTGTTCTCTTCAAATTTCACTGACGGGAAGACATTTGAAGAACTAGAAGAAATCGACGAGGAGAATCAGGACAAAAATGATGTTTCTAAGGCAGAGAATTCAACGAACAAGACATTACTGGAACTGGATAACGATGAGGCAGATCACATCACTACAGTAGATAACAGTACCTTGGATGAAAAGGAAACTATGTCTCTCCAACAAGATGATTCAAGTATGTCAGAGGCTGACCAAATTTCAGGTGCTTTCAAGGAATGTTATGAATTAAATCAGCTTGTGACTGAGGAAGATGGTCCTGAGAATCATTTTACCCCAGAGGAAGAACCACTTGTAGCTGAGACTAATAATAAAATGGAAGAGAAGGATAATGCCGATTTCAAGGAAGAAATGGTTGAAAGTTTTATTTCTGATGCCTCTCAGGATTGTCATGAAGCTTCCGAGGGTGATAGTAGCCAAGTTGATAAGGCGAGTGAACCTTGTGAGGCTGATAAGGTCAGTGAAGAAGAGAAGAACTCAAGCCAAGATATTAGTGAAGAAGAGAAGTTAGAGAGCCCAAGCAGCATTGGTGGTGAAGAACAGAGCCCGTGCAGGAAATGGATAGGGTCTGAAAGGCGCAAGAGAGGGGTTCAAGACGAGGATGAAATGAGGAAGATCAAACCCCGGGAGCCAAATTTCCTCCCTTTGGTTCCAGATCCAGAAGGAGAAAAGGTTGATCTGAAGCATCAGATGATGGATGAGAGAAAAAATGCAGAGGAATGGATGCTTGATTATGCACTGAGACAAACTGTCACAAAGCTTGCTCCTGCTAGGAAGAGGAAGGTGGCACTGCTAGTGGAAGCTTTTGAATCCGTAATCCCAATGCCCAAATGTGAAACTCGTATGAGAAACAAGTCATCCTTTGCACATCCATGGCCTATTCAAGCTTGTAGCTGA 2535 0.4209 MVQRKVPCKLGIQADHHVKSDKRLAKNLNQDGKTRGGADMKKKMKKSRSIRLSDMEILRSSPPSKKSFSQPEKPSSFVQVSHSVSSSSPQKLTPLIRTSDGSPNYMKPTSSSDAKKELFPLSLRNSKSNSKSSSSSVSANKPAKTLAKSSPSLRLVRTLTKTPSFKKSSRVSLCADMNAQRGTCSSTLKDSKFPPYLMLNPGATESEGTSVMKVCPYTYCSLNGHRHAPLPPLKSFLSARRRXLKTQKSMKLEALSPRRLKVPCEPKKESDTYVDFFIEIYAKKNGGEEEIRCMGSARRFEDEENIKSTMEENNLKAQGDDVMKQVDASLSDGSPKSEIDSEEDYGKCFDDAKIEADLKGSFLQEQEAEFADEKPLSIGSGEEISIESCCSEVSYEGEMGDSNSEASDMEWEHEKDDVDSSVLTEENDSKVESLSESSNDVSVVWLDGIINIYYEDIVAEVSQESNTKERFCIESQHHGINCDLEGTHESLETQEPSKSQEQVNCEQSFLAKKVWEELTDTEGNCGGNETVMDATVFSSNFTDGKTFEELEEIDEENQDKNDVSKAENSTNKTLLELDNDEADHITTVDNSTLDEKETMSLQQDDSSMSEADQISGAFKECYELNQLVTEEDGPENHFTPEEEPLVAETNNKMEEKDNADFKEEMVESFISDASQDCHEASEGDSSQVDKASEPCEADKVSEEEKNSSQDISEEEKLESPSSIGGEEQSPCRKWIGSERRKRGVQDEDEMRKIKPREPNFLPLVPDPEGEKVDLKHQMMDERKNAEEWMLDYALRQTVTKLAPARKRKVALLVEAFESVIPMPKCETRMRNKSSFAHPWPIQACS 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci109g0002 845 MobiDBLite consensus disorder prediction 594 769 - -
Prci109g0002 845 Pfam Plant calmodulin-binding domain 729 821 IPR012417 GO:0005516
Prci109g0002 845 MobiDBLite consensus disorder prediction 634 669 - -
Prci109g0002 845 MobiDBLite consensus disorder prediction 10 29 - -
Prci109g0002 845 MobiDBLite consensus disorder prediction 391 434 - -
Prci109g0002 845 MobiDBLite consensus disorder prediction 305 344 - -
Prci109g0002 845 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 821 IPR044681 GO:0005516
Prci109g0002 845 MobiDBLite consensus disorder prediction 1 152 - -
Prci109g0002 845 MobiDBLite consensus disorder prediction 122 152 - -
Prci109g0002 845 MobiDBLite consensus disorder prediction 406 433 - -
Prci109g0002 845 MobiDBLite consensus disorder prediction 594 613 - -
Prci109g0002 845 MobiDBLite consensus disorder prediction 732 756 - -
Prci109g0002 845 SMART CaM_binding_2 702 821 IPR012417 GO:0005516
Prci109g0002 845 MobiDBLite consensus disorder prediction 677 721 - -
Prci109g0002 845 MobiDBLite consensus disorder prediction 60 111 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci109g0002 643 821 Calmodulin-binding Proteins AT2G38800 40.102 2.37e-28 119