Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1098g0007 ATGTCTGAATGTTGGGTTTCTGATCCTAGCAAGCTTCACCTGAAGAAGAAGGACCTCACTCAAATTCGTAAAGCTGCTCGTGTGTTGAGGGATCCTGGTACGACGTCGTCCTGGAAGTCACCTCTAAGTTCCTCAAGATCCGTTACTGCTGCTTCTGCTTCTGCATGGAAGAGCAATTTCTACAGTGGAAAAGAGAATGTGTTCTTGTACAACGGGAAGAATCACAAATCATCAGGCGACAACAAGAGTGGACTGGCAAAAAACGACAACGTAGAGGAAGAAGATGATGGTGATGATGAGGATGCTGCTGGTGGCACCGGCAACGATACGTCTTCTTCATCTCTTCTGGGAAGTTTCGAGGATACCTTGAGCGATGCTCGAGGTTGCGATTCGAAGAGCGACTCTCACTTGCGAGTTGGGAGACGTTCTTATTTTCGGTGTACAGATGCTAATCGTGTTTCTTCGGCCAGAAGAAAAATGGGCAGTATCAGGAGAAAGAGTAAGAAAACCAACAGATACTTGAATAATTTGTCAAGATGTCGGCAACCAGAAACCAATCTGGGTAGGAAGTTTGTAAATTCCAAGATATTCCCGGAGGACTCAGTTGAACAGTCTGATGACACTGAAGATTACAGCAATTCTGAGGATTTAAGTCGAATTTTAGGGTCATCTCGTTTGCTGTTGAAACTCAAGCGTAGCAATTGGTCTCGTTCTTCCTCAAAGTTACTGAGAAGTAGCCGAACTGAGGACTCTTATTATACTTATAGCACTCCTGCGTTATCAACCTGCTCCCATAATAGGTATGGTCACCATAATTCAAGTACTGTTGGATCCTGGGAAGCCACAGCAAGCTCATTGAATGATGGTGATGATGAGGTAGACGATCATTTGAATTTTCCTGGCCAGAGGGGATGCGGTATTCCTTGCTGTTGGTCCAAGAGGACTCCAAAACATAGGGGGATGTGTAGGAGTTGTTATTCTCCTTCTCTTTCTGAGACTTTGAGGAGGAAAGGAAGTAGCTTATTCTGTGGAAGTAAAAGTATCTATACAAGACACCGAAGGTCCTTATCAAGCTCTAACAAGTGGAGGGTTTCTTCAAGGATTGCTCAGGGTGTTCTCCCATTGCTCCCCAGCAGTGGTGATGTTAGAGGAGGGTCATCTGTAGGAAGTGGGAGGAGTGATGATGAACTTTCCACAAACTTAGGGGAACTTTATCTTGAGGGTTTAAGTAGGTTAGATGGAAGGAGATGGTCATCAAGTTGTAGGAGTCAGGATGGTTTGGGGATTGTGGCTGTAGATGGGGAAGGGGATGAGGAAGGCACACTAGAAAATGCTAGGAGTTTCAGTCAGAAGTATAAGCCTATTTCCTTTGGTGACTTGATTGGCCAGAATATTGTGGTTCAGTCACTTATGAATGCTATTTCAAGGAATAGAATTGCTCCTGTTTATCTTTTCCAAGGTCCTCGTGGTATCGGTAAAACTTCTACGGCCAGAATTTTTGCTGCTGCCCTGAATTGTATGGCTCCAGATGTAAATAAGCCTTGTGGATACTGCAGGAATTGCACTGATCTCAATTCTGGCAAGAGTAGGGATTTCTTGGAAGTTGATGGCACCAATAAGAAAGGGATTGATAGTGTTAGATATCTATTGAAAAGACCATCAGCAGGATCACCGTCAACACCCTCACGATACAACGTATTTGTGATAGATGAGTGTCACTTGCTTCCTTCTAAGACATGGCTGGCATTTCTGAAGTTTCTGGAAGAACCACCTAATCGAGTTGTATTCATACTTATAACAACTGATCTTGACAATGTACCACTAACAATACAATCTCGAAGCCAGAAGTACCTTTTTAACAAAATTAAAGATGCTGATATTGTGGCCAGATTGACGACACTATCTGCTGAGGAGAACCTGGATGTTGAAGATGCACTGGACCTTATTGCTATGAATGCAGATGGTTCACTTCAAGATGCAGAAACTATGTTAGAACAACTGAGTTTGTTGGGGAAGAGAATAACTACATCACTTGTCAATGAACTTGTGGGTGTTATCTCGGATGAAAAATTACTAGAGCTGTTGGAGTTAGCAATGTCATCAGATACCACAGAAACAGTGAAGAGAGCCAGAGAAGTGATAGATTCCGTGGCTGATCCAATGGCTTTGATATCACAAATGGCATGCCTCATTATGGACATCATTGCAGGATCATATGCTGTCATTGATACCAAACCTAGTGATTCGTGTTTTGGTGCACGAAGTTTGAATGAATCAGAGTTGTGGAGGTTAAAGCATGCTTTGAAGCTGCTCTCAGAGGCTGAGAAACAGTTCAGGACTTCTAGTGAACGCTCAACATGGTTCACAGCCACTCTGTTACAGCTTGGTTCAATGCCTTCACCAGATCTTATCCAGTCAGGCAGCAGCAGGAGACAGAGCTGCAAGACTTCTGAATATGATCCATCAAGTGCTTCAAGAGAGGTTACTGTTCCGAAGCATAGTTCAGATGTCAGATATATTTCTCGAATGTCAACATCCCCTACATCACAGCAGCGACCTGTGAATGGCAATTCCAGACATCAAAGGGATGTGTCGTCTAAATCAGATGGTTTCAGCTTGAGTTCAAAGCCATCAAGTAGTCCTGTTCTAGGAGATGATGATGCAACACCTGCTTCATCTGATGATCTTTATTGGGAATATGATGTTAAGATGTGTTTTCTGGTTGCATATGTTGCATTTGGAGACAGAGATATTAAACTAAGGGCTGAAAGGTGCAACGTGGAGGTTAGAATTATTCACTTGCTTGATGATGAAGAGGCTGGAAACTGCTTGGCTACAGGCTGTAGAAAAGGTTCACCAGGATCATTGAGTCATGCAAGACCTGAGAAGAATCAGGTCCTGCCTCAGGAAAATGTTATCTGTAAAGACCTAATAGAGTCCATTGATTCAAAAGGTTTCCTCTCAGCATCGGGAAGATGA 2979 0.4324 MSECWVSDPSKLHLKKKDLTQIRKAARVLRDPGTTSSWKSPLSSSRSVTAASASAWKSNFYSGKENVFLYNGKNHKSSGDNKSGLAKNDNVEEEDDGDDEDAAGGTGNDTSSSSLLGSFEDTLSDARGCDSKSDSHLRVGRRSSXFRCTDANRVSSARRKMGSIRRKSKKTNRYLNNLSRCRQPETNLGRKFVNSKIFPEDSVEQSDDTEDYSNSEDLSRILGSSRLLLKLKRSNWSRSSSKLLRSSRTEDSYYTYSTPALSTCSHNRYGHHNSSTVGSWEATASSLNDGDDEVDDHLNFPGQRGCGIPCCWSKRTPKHRGMCRSCYSPSLSETLRRKGSSLFCGSKSIYTRHRRSLSSSNKWRVSSRIAQGVLPLLPSSGDVRGGSSVGSGRSDDELSTNLGELYLEGLSRLDGRRWSSSCRSQDGLGIVAVDGEGDEEGTLENARSFSQKYKPISFGDLIGQNIVVQSLMNAISRNRIAPVYLFQGPRGIGKTSTARIFAAALNCMAPDVNKPCGYCRNCTDLNSGKSRDFLEVDGTNKKGIDSVRYLLKRPSAGSPSTPSRYNVFVIDECHLLPSKTWLAFLKFLEEPPNRVVFILITTDLDNVPLTIQSRSQKYLFNKIKDADIVARLTTLSAEENLDVEXDALDLIAMNADGSLQDAETMLEQLSLLGKRITTSLVNELVGVISDEKLLELLELAMSSDTTETVKRAREVIDSVADPMALISQMACLIMDIIAGSYAVIDTKPSDSCFGARSLNESELWRLKHALKLLSEAEKQFRTSSERSTWFTATLLQLGSMPSPDLIQSGSSRRQSCKTSEYDPSSASREVTVPKHSSDVRYISRMSTSPTSQQRPVNGNSRHQRDVSSKSDGFSLSSKPSSSPVLGDDDATPASSDDLYWEYDVKMCFLVAYVAFGDRDIKLRAERCNVEVRIIHLLDDEEAGNCLATGCRKGSPGSLSHARPEKNQVLPQENVICKDLIESIDSKGFLSASGR 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1098g0007 994 CDD HLD_clamp_pol_III_gamma_tau 623 686 IPR045085 -
Prci1098g0007 994 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 451 817 - -
Prci1098g0007 994 MobiDBLite consensus disorder prediction 801 832 - -
Prci1098g0007 994 MobiDBLite consensus disorder prediction 71 118 - -
Prci1098g0007 994 NCBIfam DNA polymerase III subunit gamma/tau 448 797 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Prci1098g0007 994 Gene3D - 440 621 IPR027417 -
Prci1098g0007 994 MobiDBLite consensus disorder prediction 25 44 - -
Prci1098g0007 994 CDD AAA 462 614 - -
Prci1098g0007 994 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 472 670 IPR027417 -
Prci1098g0007 994 FunFam DNA polymerase III subunit gamma/tau 444 622 - -
Prci1098g0007 994 SMART AAA_5 480 625 IPR003593 GO:0016887
Prci1098g0007 994 Pfam DNA polymerase III, delta subunit 463 623 - -
Prci1098g0007 994 FunFam DNA polymerase III subunit gamma/tau 624 686 - -
Prci1098g0007 994 MobiDBLite consensus disorder prediction 801 890 - -
Prci1098g0007 994 MobiDBLite consensus disorder prediction 840 888 - -
Prci1098g0007 994 Gene3D - 624 686 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1098g0007 451 667 Core DNA Replication Machinery Family AT1G63160 25.688 1.72e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1098g0007 - - pcin:129299269 1852.41