Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci1098g0005 | ATGGAAAGCATACCGCACCCAATACCGAGAACAGTAGAGGAGGTTTTCAGCGACTTCAAGGGAAGAAGAGCTGGACTGATTAAGGCCCTCACTACTGATGTTGAAAAGTTCTACCAGCAGTGCGATCCTGAGAAAGAGAACTTGTGTCTATATGGATTACCAAATGAAACATGGGAAGTGAATTTGCCTGTTGAGGAAGTACCTCCTGAACTTCCTGAGCCAGCATTAGGTATAAACTTTGCGAGGGATGGGATGCAAGAGAAGGATTGGTTGTCACTGGTTGCAGTTCACAGTGATTCTTGGCTGCTTGCTGTGTCTTTCTATTTTGGTGCTCGTTTTGGATTTGGTAAGAATGAAAGGAAAAGGCTTTTTCAGATGATAAATGATCTCCCAACCATATTTGAAGTTGTGACAGGAAGCGCCAAGCAATCAAAGGATCAGTCAGCTGCTAACAATAATGGTAGCAAAAGCAAGTCAAGCGGGAAGTCATCCCAATCTGACTCTCAGGCCAAGGGAGTGAAGATGTCTCCCCCTCCCAAAGAAGAGGATGAGAGTGGAGAAGAAGAAGAAGAAGATGACGAACAGGGGGCAACGTGTGGAGCATGCGGTGATAATTATGGCACTGATGAGTTCTGGATCTGTTGCGATATATGTGAGAGATGGTTCCATGGCAAATGTGTGAAAATCACCCCTGCTAAAGCTGAGCACATCAAGCAATACAAGTGCCCTAGCTGCAGTAACAAGAGGGCTAGAGTTTAG | 759 | 0.4532 | MESIPHPIPRTVEEVFSDFKGRRAGLIKALTTDVEKFYQQCDPEKENLCLYGLPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVSFYFGARFGFGKNERKRLFQMINDLPTIFEVVTGSAKQSKDQSAANNNGSKSKSSGKSSQSDSQAKGVKMSPPPKEEDESGEEEEEDDEQGATCGACGDNYGTDEFWICCDICERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV | 252 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci1098g0005 | 252 | SMART | PHD_3 | 198 | 246 | IPR001965 | - | |
Prci1098g0005 | 252 | SUPERFAMILY | FYVE/PHD zinc finger | 187 | 249 | IPR011011 | - | |
Prci1098g0005 | 252 | Pfam | Alfin | 11 | 139 | IPR021998 | GO:0006355|GO:0042393 | |
Prci1098g0005 | 252 | MobiDBLite | consensus disorder prediction | 141 | 172 | - | - | |
Prci1098g0005 | 252 | Pfam | PHD-finger | 199 | 248 | IPR019787 | - | |
Prci1098g0005 | 252 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 188 | 247 | IPR013083 | - | |
Prci1098g0005 | 252 | ProSiteProfiles | Zinc finger PHD-type profile. | 196 | 248 | IPR019787 | - | |
Prci1098g0005 | 252 | MobiDBLite | consensus disorder prediction | 182 | 197 | - | - | |
Prci1098g0005 | 252 | PANTHER | CPG BINDING PROTEIN | 9 | 251 | IPR045104 | GO:0006355|GO:0042393 | |
Prci1098g0005 | 252 | MobiDBLite | consensus disorder prediction | 141 | 198 | - | - | |
Prci1098g0005 | 252 | FunFam | PHD finger alfin-like protein | 191 | 247 | - | - | |
Prci1098g0005 | 252 | ProSitePatterns | Zinc finger PHD-type signature. | 199 | 245 | IPR019786 | - | |
Prci1098g0005 | 252 | CDD | PHD_AL_plant | 199 | 248 | IPR044104 | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci1098g0005 | 1 | 249 | Alfin-like Transcription Factor Family | AT1G14510 | 82.731 | 1.95e-136 | 382 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | Alfin-like | Prci1098g0005 | Alfin | 1.9e-69 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci1098g0005 | K26274 | - | gmx:100807826 | 435.261 |