Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1097g0002 ATGGGAATCGAAAGAGGAAACCTCAAGGGCTTTCGGAGCGGCAGCTGGACTGTGCCGCCAAAGCCGTGTGACTCGTGCAAATCGGCGACAGCGGCTGTTTTCTGCCGAGCCGACTCGGCTTTCCTCTGCATGCTCTGTGACAACGAGATTCATTCCGCCAATAAGCTGGCTTTGCGCCACGAGCGTGTGTGGATGTGCGAGGTGTGCGAGCAGGCTCCCGCCTCCGTCACCTGCAAGGCCGACGCCGCCGCGCTCTGCGTCACTTGCGATTCGGATATCCATTCCGCCAATCCGCTCGCCCGCCGTCACGAGCGTGTCCCCGTGGAGCCCTTCTTTGATTCCGCCGACTCTGTAGCGAAATCCTCTGCTGCTGCCCTTAACTTGCTGGTTCCAACTGATAACGGAATTGGATCCGATGGATTCCTCCAGGAAGAATCCGAATCAGCATCGTGGCTAATTTCAAATCCCAGTTTCAACCCAAAGATCATGGATGTTCCGGATATCAAATCGGGCGATATGTTTTTCCCTGAAATGGAGTATCCTTTGCTGGATTTCGATTACTCAAACTCCTTCGATCAGAATGACAATAACAGAGGGGGTAACAACGATGGTGTAGTCCCAGTCCAAGCTCGGGTTATGAACCATATGGAGAGTTGCTTCGACATCGATTTTTGCAGATCCAAGCTCTCCTCAATTAACTATCCAACGCAGTCGTTTACCCGTCAAAGCGTATCGTCTTCTTCCGTTGATGTTGGAGTAGTGCCAGACGGAGGAAACACGGTGTCGGAAATCTCGTTCCCGATCGGCCAGAACATAAGTAACAGTTCGGAATCGAGCGGAATCATATCGGCCGGTAATTCTACAACGCAATTGGGAAGTTCGGCGAGTGGCATGAACCGAGAAGCTAGGGTTTTGAGATACAGGGAGAAGAGGAAGAACCGGAAGTTCGAGAAAACCATACGGTACGCGTCGCGGAAGGCTTACGCAGAGACTCGGCCGAGGATCAAAGGGCGGTTCGCTAAACGGACCGAGATGGAGTCGGATTTTGACCGGCTGTTCAACGCGGTTGAACCCACAACAGATCTGTTGCTGGATACTCAGTACGGCGTTGTGCCCTCTTTTTAA 1125 0.5271 MGIERGNLKGFRSGSWTVPPKPCDSCKSATAAVFCRADSAFLCMLCDNEIHSANKLALRHERVWMCEVCEQAPASVTCKADAAALCVTCDSDIHSANPLARRHERVPVEPFFDSADSVAKSSAAALNLLVPTDNGIGSDGFLQEESESASWLISNPSFNPKIMDVPDIKSGDMFFPEMEYPLLDFDYSNSFDQNDNNRGGNNDGVVPVQARVMNHMESCFDIDFCRSKLSSINYPTQSFTRQSVSSSSVDVGVVPDGGNTVSEISFPIGQNISNSSESSGIISAGNSTTQLGSSASGMNREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEMESDFDRLFNAVEPTTDLLLDTQYGVVPSF 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1097g0002 374 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 22 354 IPR045281 GO:0009909
Prci1097g0002 374 ProSiteProfiles CCT domain profile. 300 342 IPR010402 GO:0005515
Prci1097g0002 374 ProSiteProfiles Zinc finger B-box type profile. 18 65 IPR000315 GO:0008270
Prci1097g0002 374 Pfam B-box zinc finger 63 108 IPR000315 GO:0008270
Prci1097g0002 374 Pfam B-box zinc finger 20 62 IPR000315 GO:0008270
Prci1097g0002 374 ProSiteProfiles Zinc finger B-box type profile. 61 108 IPR000315 GO:0008270
Prci1097g0002 374 CDD Bbox1_BBX-like 66 108 - -
Prci1097g0002 374 CDD Bbox1_BBX-like 22 65 - -
Prci1097g0002 374 SMART bboxneu5 66 108 IPR000315 GO:0008270
Prci1097g0002 374 SMART bboxneu5 18 65 IPR000315 GO:0008270
Prci1097g0002 374 Pfam CCT motif 300 342 IPR010402 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1097g0002 1 374 C2C2-CO-like Transcription Factor Family AT5G57660 52.604 6.31e-114 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Prci1097g0002 zf-B_box 4.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1097g0002 - - gmx:100805693 465.307