Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci107g0003 ATGGGTTTCGTCGCTCTATTTCTCCGAGGTCTTGGCTTGGGTCTCCTCTATAGCTGTACATCTCTCTGGTTTCTCTCCACAGCTTGTAGTTCAGTGACGTCAAATCACAGCACTGAGTATGAAGTAGTAAAGAGGAAACTCAGATCTCTGATCTATTCAACAACATTCATAGCTGGGCTGCATCCATCCAGCATTATCTCAAATTTGGACACAACCACCAAGAAATTCAAACCTGCAATGGCGAACACTGTCTTGGAAGAATCTTCCTCAACCTCTGGTGCTTCTAATTCAACTCTAACTTGGAAATATGACGTTTTTTTGAGTTTTAGAGGAGAAGATTCTCGCTTGAAGTTTACTGATCACTTGTATCATGCTCTCACTAGAAGTGGGATAAGAACTTTTAGAGATGATGAAGGACTTGAGAGAGGAGAAGTTATATCAGCACAACTCATTCAAGCAATTAAGGATTCTCGCTGCGCAATTGTGGTTCTCTCTCAAAATTATGCAGATTCCAAATGGTGTTTGGACGAACTACAACAAATTCTTGCAAGCATGAACGAAATGGGTCGACGAGTTTTTCCAATCTTCTATGACGTAGATCCATCTGATGTAAGAAATCAAAGAAAAAGATTCGGAGAAGCTCTGGCCAATCATGGAAAAAGACACAGAGGAAACATGGACACAGTGCAGATTTGGAAAAACTCTTTATCTGAAATTGGAAACATATCTGGTTGGGACACCAGAAGTCGGCCCGAAGCGCACCTTATCGATGAAGTAGTGGGAGCAATATGGAAATATTTATGCTCCCAATTACCATCTTATGATGATAATCTGGTTGGCACAAAGCGAAGAATGGTTGATCTAATGTCATGCTTAGAGATTGGGTTGGATGACATTTACTTTGTTGGGATATGGGGTATGGGTGGTGTCGGCAAAACAACTCTTGCAAGAGTTGTTTATGAACAAATCTCTGACAGATTTGAAATGTATTGCTTTCTTGCCAATGTTAGAGAAACTTTGCAAACAAAAGGCCTAGTCTCTTTGCAGAAAAGACTTCTTTCTTATCTTGGCATAAACAAGAAAATTCATGATGATTATGAAGGAATGAAGATGATAAGAAAGCTTTTTTGCAATAAAAAGGTTCTTCTTGTCCTTGATGATTTAGATGATACTAGTCAATTAGAGAAGTTGGCTGAAAGTTCAAATTGGTTTGGTAAAGGAAGCAGAATAATTATCACAACAAGAAATAAGCATGTGCTCACTTCATGTGGAGGGAAAATATATGAGATGAAAGCCATGGAGAAAGTTGAGTCTCTTCAACTTTTTTCTAAGAAAGCATTTAACAAAGATCATCCTGAAGAAGGTTATTTGAAGTTATCTAAATCTGTGGTTGCATATGCAGCAGGTCTTCCTTTAGCACTTAAAGTTCTAGGGGTTGGAGAAAAGATGAAGTGGCCCAAGTTTTGA 1467 0.3879 MGFVALFLRGLGLGLLYSCTSLWFLSTACSSVTSNHSTEYEVVKRKLRSLIYSTTFIAGLHPSSIISNLDTTTKKFKPAMANTVLEESSSTSGASNSTLTWKYDVFLSFRGEDSRLKFTDHLYHALTRSGIRTFRDDEGLERGEVISAQLIQAIKDSRCAIVVLSQNYADSKWCLDELQQILASMNEMGRRVFPIFYDVDPSDVRNQRKRFGEALANHGKRHRGNMDTVQIWKNSLSEIGNISGWDTRSRPEAHLIDEVVGAIWKYLCSQLPSYDDNLVGTKRRMVDLMSCLEIGLDDIYFVGIWGMGGVGKTTLARVVYEQISDRFEMYCFLANVRETLQTKGLVSLQKRLLSYLGINKKIHDDYEGMKMIRKLFCNKKVLLVLDDLDDTSQLEKLAESSNWFGKGSRIIITTRNKHVLTSCGGKIYEMKAMEKVESLQLFSKKAFNKDHPEEGYLKLSKSVVAYAAGLPLALKVLGVGEKMKWPKF 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci107g0003 488 PRINTS Disease resistance protein signature 301 316 - -
Prci107g0003 488 PRINTS Disease resistance protein signature 375 389 - -
Prci107g0003 488 PRINTS Disease resistance protein signature 467 481 - -
Prci107g0003 488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 269 478 IPR027417 -
Prci107g0003 488 Gene3D - 97 268 IPR035897 -
Prci107g0003 488 SMART till_3 102 242 IPR000157 GO:0007165
Prci107g0003 488 FunFam Disease resistance protein (TIR-NBS-LRR class) 99 269 - -
Prci107g0003 488 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 103 478 IPR044974 GO:0006952
Prci107g0003 488 Pfam TIR domain 102 273 IPR000157 GO:0007165
Prci107g0003 488 ProSiteProfiles TIR domain profile. 101 271 IPR000157 GO:0007165
Prci107g0003 488 Pfam NB-ARC domain 299 479 IPR002182 GO:0043531
Prci107g0003 488 SUPERFAMILY Toll/Interleukin receptor TIR domain 95 245 IPR035897 -
Prci107g0003 488 Gene3D - 433 483 IPR042197 -
Prci107g0003 488 Gene3D - 269 432 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci107g0003 103 477 WRKY Transcription Factor Family AT4G12020 28.346 1.40e-37 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci107g0003 - - pcin:129295428 947.192