Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci105g0001 ATGGCGGCACCGAAGCCACGCAACACTCGATCAACTTCTCTTAGGGATGCCTCTGACTCCTCCAAGATGGAGGGCACCGGTACATGGGATGCCCTCCAATGGACCAAGTTTCAGCCCGGTTCACGATACGTTTCGCATGGCAATTTGGATTTCTTGTTTGAGGAAGAAAACGTCATAGCCCAGGGACATGGTGTTGTTCTTATTAATTCAGATGATGCTGGCACGTTGATGGTCACAAATTTTCGTCTTATTTTTCTGAGTGATCGAACTAGAAATATTATTGCCCTGGGAACAATTCCACTTGCAACGGTTGAGAAGTTTAACAAGATAGCTGTAAAGATGCTGTCAGCTAATCGTCAAATAGACAAGGCAACCCCGCAAAGACTGCTCCAGGTTATTGGAAAAGATATGAGAATTATAGTTTTTGGTTTCAGGCCTCGTACAAAACAGAGGCGTGTCATATTTGATGCCTTACTAAGAAGTACAAAGCCAGCTGTACTTTGGGATCTTTATGCATTTGTGTGTGGACCTTCTAGGTTTACTAACTCTAGCCCAAAAGTGCGCCTACTAGATGAGTATTTCCGGCTTCTTGGAAAACGCTATTACCGTGCTTCAATCAATATGATTGAAAGTGGGTCCTTTACCTTGTCAAATGACTTGTGGAGAATAAGTAAAGTGAACTCTAACTACAATGTGTGCCCTAGTTATCCTTTTTCTTTGATTGTACCAAAGACCATAAGTGATGATGAAGTGCAACAAGCTTCCACCTTTCGTGGTAGATGTCGGGTTCCTGTAGTTTCATGGTGCCATCCAGATACGGGAGCAGTTCTTGCACGTTCATCCCAACCTTTAGTTGGTCTCATGATGAATATGAGGAGCAATGCAGATGAAAAGCTTGTGGCTGGATTATGTGGCAAGCTTAGTGATGGCTCACGCAGGAAGCTATATATAGCTGATGCAAGACCGAGGAAAAATGCTTTAGCTAATGGGGCCATGGGAGGTGGTTCAGAATCATCTTCAAATTACTTTCAGTGTGAGGTAATTTTTTTTGGCATAGACAACATCCATGCAATGAGAGACAGCTTGGCTCGGCTGAGAGAATACCTGGACACTCATGGAAAAGCATCATCGGATGGAATGTCATCTTTTTTGAGACATGGTGGGTCAACATGGGGTGGAGGCAATCTAAGTAGTATGTCTACTTCAGTATCTACTCTTGGGGACAGTGGGTGGCTACTACACGTTCATGTCTTAGCTGGGGCTGCTTGGATTGCTGCTCGCCTTGATATGGAAAAGGCTTCTGTTCTTGTACATTGCAGTGATGGCTGGGATAGAACGAGTCAGTTGGTTTCTCTTGCTAATTTGTTACTTGATCCATACTACCGCACATTCACAGGGTTTCAGGCACTTGTTGAAAAAGACTGGCTAGCATTTGGTCATCCATTTTCAGATCGTATGGGAATGCCCCCAGTCTCTGGAAGTGGCAACATGACTTTTGAGTTGACTAGACAGTCTTCCACTGGAAGTTGCCCTTCACCACCCATGCGTCAGTCATCATTCACATCTCAATCTTCCCCTTCTCATGCACAGACTTCAAACCACTACTCTCCCATTCTTTTGCAGTGGGTTGATTGTGTTTCACAACTGCTGCGGATGTATCCTTTTGCTTTTGAGTTCTCCTCGGCTTTCCTGGTGGACTTCCTAGACTGTGTTCTTTCTTGTCGATTTGGAAACTTCTTCTGTAATAGTGAGAAGGAAAGGCAGCAATGCAATGTTTTTGACGCTTGTGGATGTTTGTGGGCATACTTGGCTGACTTACGTGGTTCTGAAGGAAAATCTCATGTGCATTTTAATCTCTATTATGATCCATTGAAGCACAATGGTCCTATCTTGCCCCCAGCAGCAGCTTTAGCCCCAACACTCTGGCCCCAATTTCATCTTCGCTGGGCTTGTCCAGAAGAAGCACAAGCTTCTGTTGAAATTGAAGCAGAATGTAGACAAATGTTTCTGAAATACTCTGAGATGCAGAAGGCTAAAGAAATGGCAGAGAGGAAAGCCAAAGAAATTGAAATTGCCATGGACGCATTGAGTTCAGAACTACGAAATGAGAAACAGTTAAGATGGTCAGCTATGAACATGACCAAGAAAACAAGCAAAGAGAATGTGGCCATGAAACGAGCTATTCAGTCATTGGGGTGTAAGTTTCAGTTATCTGACAATGGCGATTGTGTTTTTGATATTGAAAGCGATTTAGTGGTGTCAGCACAAACTGCTATGCGCCCTTCCAGCAGAAAGCATTCGGATAGCACATCACATGATGACAAGAAGGATCTGTCTGTTTCAGTAGCAGTTACAGAGGATGATGATCATGCAAACAATCCTATTTTTCGAGTGTGTGAAGCTCTATGCCCACTGCGTATTCCAAATGGAAGTTGCAGGTGGCCAAATGCTGGTTGTGCACGACTAAGTAGTCAGTTTGTTGGTTTAAGGGCAAATTTTGATGCATTTGACCAATTGTCGATTGATGATAGTTATTTTAAATCTGAATGA 2550 0.4349 MAAPKPRNTRSTSLRDASDSSKMEGTGTWDALQWTKFQPGSRYVSHGNLDFLFEEENVIAQGHGVVLINSDDAGTLMVTNFRLIFLSDRTRNIIALGTIPLATVEKFNKIAVKMLSANRQIDKATPQRLLQVIGKDMRIIVFGFRPRTKQRRVIFDALLRSTKPAVLWDLYAFVCGPSRFTNSSPKVRLLDEYFRLLGKRYYRASINMIESGSFTLSNDLWRISKVNSNYNVCPSYPFSLIVPKTISDDEVQQASTFRGRCRVPVVSWCHPDTGAVLARSSQPLVGLMMNMRSNADEKLVAGLCGKLSDGSRRKLYIADARPRKNALANGAMGGGSESSSNYFQCEVIFFGIDNIHAMRDSLARLREYLDTHGKASSDGMSSFLRHGGSTWGGGNLSSMSTSVSTLGDSGWLLHVQXVLAGAAWIAARLDMEKASVLVHCSDGWDRTSQLVSLANLLLDPYYRTFTGFQALVEKDWLAFGHPFSDRMGMPPVSGSGNMTFELTRQSSTGSCPSPPMRQSSFTSQSSPSHAQTSNHYSPILLQWVDCVSQLLRMYPFAFEFSSAFLVDFLDCVLSCRFGNFFCNSEKERQQCNVFDACGCLWAYLADLRGSEGKSHVHFNLYYDPLKHNGPILPPAAALAPTLWPQFHLRWACPEEAQASVEIEAECRQMFLKYSEMQKAKEMAERKAKEIEIAMDALSSELRNEKQLRWSAMNMTKKTSKENVAMKRAIQSLGCKFQLSDNGDCVFDIESDLVVSAQTAMRPSSRKHSDSTSHDDKKDLSVSVAVTEDDDHANNPIFRVCEALCPLRIPNGSCRWPNAGCARLSSQFVGLRANFDAFDQLSIDDSYFKSE 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci105g0001 850 Gene3D - 63 162 IPR011993 -
Prci105g0001 850 PANTHER MYOTUBULARIN-RELATED 43 774 IPR030564 -
Prci105g0001 850 MobiDBLite consensus disorder prediction 759 781 - -
Prci105g0001 850 SUPERFAMILY PH domain-like 52 175 - -
Prci105g0001 850 MobiDBLite consensus disorder prediction 1 24 - -
Prci105g0001 850 Coils Coil 673 707 - -
Prci105g0001 850 ProSiteProfiles Myotubularin phosphatase domain. 198 647 IPR010569 -
Prci105g0001 850 Pfam Myotubularin-like phosphatase domain 183 589 IPR010569 -
Prci105g0001 850 ProSitePatterns Tyrosine specific protein phosphatases active site. 438 448 IPR016130 GO:0016311|GO:0016791
Prci105g0001 850 MobiDBLite consensus disorder prediction 492 529 - -
Prci105g0001 850 MobiDBLite consensus disorder prediction 766 781 - -
Prci105g0001 850 MobiDBLite consensus disorder prediction 496 529 - -
Prci105g0001 850 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 214 651 IPR029021 -
Prci105g0001 850 CDD PTP-MTM-like 261 549 - -
Prci105g0001 850 SMART gram2001c 49 111 IPR004182 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci105g0001 1 848 Protein tyrosine phosphatase (PTP) family AT3G10550 64.747 0.0 1144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci105g0001 K18081 - gmx:100781842 1264.21