Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1056g0001 ATGATGCATCAACGGAAGGAGGAGGAGGATGATGAACAAAACTATGAAATTACTCAAGATGACATTAAGGCTGTAGCACTATCTTTGACTGCTGGGGCATACGAAACTTCTGCTGTCGCTATCGAGTGGACTCTATCTGAACTTTTGAGGAATCCTAGGGTGATGAAGAATCTACAAGATGAGCTAGAAACTGTGGTTGGAATGAACAGAATGGTGCAAGAGACAGATTTATCAAAGTTGAATTACTTGAACTTGGTGGTCATGGAGAATTTCAGACTCCATCCCATTGCACCATTCATCCCTCGAGCTTCCACAAAGGATGTTATGGTTGATGGATACTACATAGAGAAAAACGCACGAGTCTTGATAAATTTATGGGCACTAGGACGAGATCCTCGTATATGGTCGGATGATACTGATGTGTTTTATCCAGAAAGGTTCTTGAATAATAGTAACTCAAACAACATTCAAGAATATGATGCTCAACTTCTTTCATTCGGGTCGGGTCGTAGAAAATGTCCGGGAATGCAGATGGGTTTAACTACGGTTAAACTTGTCGCAGCTCAACTTGTGCACTGCTTTAATTGGGAGCTTCCTTTTGGGATGAAACCTGCTGATTTGGACATGACCGAATCATTTGGCCTCTCGTTGACAAGATCTAAGCACTTGTCAGCTGTGCTATCCCATCGCCTTTCTTCCAAGGCATACAATGACTGA 717 0.4226 MMHQRKEEEDDEQNYEITQDDIKAVALSLTAGAYETSAVAIEWTLSELLRNPRVMKNLQDELETVVGMNRMVQETDLSKLNYLNLVVMENFRLHPIAPFIPRASTKDVMVDGYYIEKNARVLINLWALGRDPRIWSDDTDVFYPERFLNNSNSNNIQEYDAQLLSFGSGRRKCPGMQMGLTTVKLVAAQLVHCFNWELPFGMKPADLDMTESFGLSLTRSKHLSAVLSHRLSSKAYND 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1056g0001 238 PRINTS P450 superfamily signature 85 96 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1056g0001 238 PRINTS P450 superfamily signature 173 184 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1056g0001 238 PRINTS P450 superfamily signature 32 49 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1056g0001 238 PRINTS P450 superfamily signature 164 173 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1056g0001 238 Gene3D Cytochrome P450 1 235 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1056g0001 238 Pfam Cytochrome P450 7 216 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1056g0001 238 SUPERFAMILY Cytochrome P450 4 230 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1056g0001 238 PANTHER CYTOCHROME P450 93A3-LIKE 7 231 - -
Prci1056g0001 238 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 166 175 IPR017972 GO:0005506|GO:0016705
Prci1056g0001 238 PRINTS E-class P450 group I signature 84 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1056g0001 238 PRINTS E-class P450 group I signature 21 38 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1056g0001 238 PRINTS E-class P450 group I signature 41 67 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1056g0001 238 PRINTS E-class P450 group I signature 163 173 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1056g0001 238 PRINTS E-class P450 group I signature 173 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1056g0001 7 231 Monolignol Biosynthesis Gene Families AT4G36220 44.000 2.85e-67 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1056g0001 - - pcin:129299165 480.33