Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci104g0011 ATGCCATGGACCATTCAAACTTGTGCCATCATGATGGCCAAACACACGAACCTCCAGCTTATTGCCTACTCACAAGAGATTGTAGATGGACAGCCAATTTTTGTTTCTTCAAATTGTTTTCCTATTAAGGCTTCGAACTTTGAACCAGCAGGCCATGCCTTCCATTCAGCTGCCCTTAAACTTCTTGGTGTTGAGGAAGATAATCCAGATGGTGATGATAAAAAGGTGGTTGATGATAAGGAACAGATGTATTTTGCATCATCTGATTCTTATAGCAGCAAGAGTAAAAAGAAATCTGGTGCTGGAGACAAGCAACAGGATCACTATGCATTATTGGGTTTGGGCCATTTAAGGTATCTTGCTACGGAGGATCAAATTCGTAAAAGCTATCGTGAAACTGCCTTAAGGTATCATCCAGATAAACAGGCTGCTCTTCTGCTCGGTGAGGAGACTGAAGTGGCAAAACAGGCAAAGAAGGATGAAATAGAAAGTCATTTTAAGGCAATCCAGGAAGCATATGAAGTACTGATCGATCCGGTAAAGAGAAGAATATATGATTCCACTGATGAGTTTGATGATGAAATTCCCACTGATTGTTCTCCGCAAGACTTCTTCAAAGTGTTTGGTCCTGCTTTCATGCGGAATGGACGGTGGTCAGTTAGTCAACCAGTTCCATCTTTAGGAGATGACAATACTCCACTAAAAGAAGTTGATGAATTCTATGATTTCTGGTATGCATTTAAAAACTGGAGGGAGTTTCCTCATGCTGATGAATTTGATCTTGAGCAAGCTGAATCTCGAGACCATAGGAGGTGGATGGAAAGGCAGAATGCAAAATTGTCAGAAAAAGCTAGGAAGGAAGAGTATGCACGAATTCGTGCTCTTGTTGATAATGCTTATAAGAGAGACCCAAGAATACTGAGGAGAAAGGAAGAGGAAAAGGCTGAGAAGCAGAGGAAAAAGGAGGCTAAGATTCTGGCCAAAAAACTGCAGGAAGAAGAAGCTGCTAGAATTGCAGAAGAAGAGAAGAGACGGAAGGATGAGGAAGAGAGGAAAGCTGCAGAAGCTGCTTTACAACAAAAGAAGGTGAAGGAGAAAGAGAAAAAGCTCTTGCGAAAAGAGCGGACTCGTCTTCGAACACTTGCAGCACCTGTCTTGTCAGAGAGACTACGTGACATATCTGAGGATGATGTAGAAAGTCTTTGCCTGTCACTCGATATTGAGGAGTTGAAGAGTTTGTGCCAAATGATTGAAGGAAAAATCATCTCAGAGCAAGCGGAAATTCTAAGAGATGCACATGGTTCTAAAAAAGATGCAGATGACAAGAAAGGTGAGAAAACTGATAAAAAGGATGGTTCTGTAAGTGGCAGTGGCAGTGCCTCACTAGGGAATACCAATGAGAAGAAGGAAAACCCTTGGAGTAAAGAAGAAATCGAGCTATTGAGAAAAGGGATGCAAAAATATCCTAAAGGAACTTCTCGTAGGTGGGAGGTCATTTCAGAGTACATTGGTACGGGAAGATCTGTGGAAGAAATTTTGAAGGCAACCAAAACAGTTCTCCTCCACAAGCCTGATTCTTCCAAATCATTTGATGCATTCCTTGAGAAAAGGAAACCTGCACCAACAATTGCTTCTCCTCTCTCAACCCGAGAAGAATTAACTGGTGAATCAACTCCTGGAAGGCCTGAAAACAGTGCTACCTCAACGACAAAGAACTCTGAAGAGTCTCATGGCAAGAGTACTTCCAACAACCCTAAATCTTTTGGTTCGGCTAGTGCCAATGGAGCTTCGTCTAGTTCAGATCAAGATGTGTGGTCTGCTGTTCAGGAAAGAGCACTGGTCCAGGCTCTGAAAGCTTTCCCTAAGGAAACTAACCAGAGATGGGAACGAGTTGCGGCTGCTGTTCCAGGGAAGACTCTGAATCAATGCAAGAAAAAATTTGCAATGCTGAAAGAGAATTTCAGAAACAAGAAAAGTGCAGCTTAA 1986 0.423 MPWTIQTCAIMMAKHTNLQLIAYSQEIVDGQPIFVSSNCFPIKASNFEPAGHAFHSAALKLLGVEEDNPDGDDKKVVDDKEQMYFASSDSYSSKSKKKSGAGDKQQDHYALLGLGHLRYLATEDQIRKSYRETALRYHPDKQAALLLGEETEVAKQAKKDEIESHFKAIQEAYEVLIDPVKRRIYDSTDEFDDEIPTDCSPQDFFKVFGPAFMRNGRWSVSQPVPSLGDDNTPLKEVDEFYDFWYAFKNWREFPHADEFDLEQAESRDHRRWMERQNAKLSEKARKEEYARIRALVDNAYKRDPRILRRKEEEKAEKQRKKEAKILAKKLQEEEAARIAEEEKRRKDEEERKAAEAALQQKKVKEKEKKLLRKERTRLRTLAAPVLSERLRDISEDDVESLCLSLDIEELKSLCQMIEGKIISEQAEILRDAHGSKKDADDKKGEKTDKKDGSVSGSGSASLGNTNEKKENPWSKEEIELLRKGMQKYPKGTSRRWEVISEYIGTGRSVEEILKATKTVLLHKPDSSKSFDAFLEKRKPAPTIASPLSTREELTGESTPGRPENSATSTTKNSEESHGKSTSNNPKSFGSASANGASSSSDQDVWSAVQERALVQALKAFPKETNQRWERVAAAVPGKTLNQCKKKFAMLKENFRNKKSAA 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci104g0011 661 SMART dnaj_3 106 181 IPR001623 -
Prci104g0011 661 MobiDBLite consensus disorder prediction 453 468 - -
Prci104g0011 661 FunFam Myb family transcription factor 599 659 - -
Prci104g0011 661 Pfam Myb-like DNA-binding domain 471 512 IPR001005 -
Prci104g0011 661 Pfam Myb-like DNA-binding domain 604 650 IPR001005 -
Prci104g0011 661 SMART sant 469 521 IPR001005 -
Prci104g0011 661 SMART sant 601 653 IPR001005 -
Prci104g0011 661 MobiDBLite consensus disorder prediction 432 477 - -
Prci104g0011 661 ProSitePatterns Nt-dnaJ domain signature. 166 185 IPR018253 -
Prci104g0011 661 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 13 660 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Prci104g0011 661 ProSiteProfiles dnaJ domain profile. 107 189 IPR001623 -
Prci104g0011 661 Gene3D - 595 661 - -
Prci104g0011 661 MobiDBLite consensus disorder prediction 432 452 - -
Prci104g0011 661 CDD SANT 605 651 IPR001005 -
Prci104g0011 661 Gene3D - 465 522 - -
Prci104g0011 661 SUPERFAMILY Chaperone J-domain 105 213 IPR036869 -
Prci104g0011 661 Coils Coil 307 376 - -
Prci104g0011 661 CDD SANT 472 512 IPR001005 -
Prci104g0011 661 SUPERFAMILY Homeodomain-like 471 514 IPR009057 -
Prci104g0011 661 Gene3D DnaJ domain 90 200 IPR036869 -
Prci104g0011 661 ProSiteProfiles Myb-like domain profile. 465 520 IPR001005 -
Prci104g0011 661 SUPERFAMILY Homeodomain-like 603 658 IPR009057 -
Prci104g0011 661 MobiDBLite consensus disorder prediction 518 604 - -
Prci104g0011 661 MobiDBLite consensus disorder prediction 547 604 - -
Prci104g0011 661 Pfam DnaJ domain 107 186 IPR001623 -
Prci104g0011 661 CDD DnaJ 107 178 IPR001623 -
Prci104g0011 661 PRINTS DnaJ domain signature 161 181 IPR001623 -
Prci104g0011 661 PRINTS DnaJ domain signature 59 77 IPR001623 -
Prci104g0011 661 PRINTS DnaJ domain signature 130 145 IPR001623 -
Prci104g0011 661 ProSiteProfiles SANT domain profile. 600 655 IPR017884 -
Prci104g0011 661 ProSiteProfiles Myb-like domain profile. 597 651 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci104g0011 108 307 C2H2 Transcription Factor Family AT1G74250 28.870 5.72e-18 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci104g0011 DnaJ 1.5e-17 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci104g0011 K09522 - gmx:100806665 868.611