Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci104g0010 ATGATGGCCAAACACACGAACCTCCAGCTTATTGCCTACTCACAAGAGATTGTAGATGGACAGCCAATTTTTGTTTCTTCAAATTGTTTTCCTATTAAGGCTTCGAACTTTGAACCAGCAGGCCATGCCTTCCATTCAGCTGCCCTTAAACTTCTTGGTGTTGAGGAAGATAATCCAGATGGTGATGATAAAAAGGTGGTTGATGATAAGGAACAGATGTATTTTGCATCATCTGATTCTTATAGCAGCAAGAGTAAAAAGAAATCTGGTGCTGGAGACAAGCAACAGGATCACTATGCATTATTGGGTTTGGGCCATTTAAGGTATCTTGCTACGGAGGATCAAATTCGTAAAAGCTATCGTGAAACTGCCTTAAGGTATCATCCAGATAAACAGGCTGCTCTTCTGCTCGGTGAGGAGACTGAAGTGGCAAAACAGGCAAAGAAGGATGAAATAGAAAGTCATTTTAAGGCAATCCAGGAAGCATATGAAGTACTGATCGATCCGGTAAAGAGAAGAATATATGATTCCACTGATGAGTTTGATGATGAAATTCCCACTGATTGTTCTCCGCAAGACTTCTTCAAAGTGTTTGGTCCTGCTTTCATGCGGAATGGACGGTGGTCAGTTAGTCAACCAGTTCCATCTTTAGGAGATGACAATACTCCACTAAAAGAAGTTGATGAATTCTATGATTTCTGGTATGCATTTAAAAACTGGAGGGAGTTTCCTCATGCTGATGAATTTGATCTTGAGCAAGCTGAATCTCGAGACCATAGGAGGTGGATGGAAAGGCAGAATGCAAAATTGTCAGAAAAAGCTAGGAAGGAAGAGTATGCACGAATTCGTGCTCTTGTTGATAATGCTTATAAGAGAGACCCAAGAATACTGAGGAGAAAGGAAGAGGAAAAGGCTGAGAAGCAGAGGAAAAAGGAGGCTAAGATTCTGGCCAAAAAACTGCAGGAAGAAGAAGCTGCTAGAATTGCAGAAGAAGAGAAGAGACGGAAGGATGAGGAAGAGAGGAAAGCTGCAGAAGCTGCTTTACAACAAAAGAAGGTGAAGGAGAAAGAGAAAAAGCTCTTGCGAAAAGAGCGGACTCGTCTTCGAACACTTGCAGCACCTGTCTTGTCAGAGAGACTACGTGACATATCTGAGGATGATGTAGAAAGTCTTTGCCTGTCACTCGATATTGAGGAGTTGAAGAGTTTGTGCCAAATGATTGAAGGAAAAATCATCTCAGAGCAAGCGGAAATTCTAAGAGATGCACATGGTTCTAAAAAAGATGCAGATGACAAGAAAGGTGAGAAAACTGATAAAAAGGATGGTTCTGTAAGTGGCAGTGGCAGTGCCTCACTAGGGAATACCAATGAGAAGAAGGAAAACCCTTGGAGTAAAGAAGAAATCGAGCTATTGAGAAAAGGGATGCAAAAATATCCTAAAGGAACTTCTCGTAGGTGGGAGGTCATTTCAGAGTACATTGGTACGGGAAGATCTGTGGAAGAAATTTTGAAGGCAACCAAAACAGTTCTCCTCCACAAGCCTGATTCTTCCAAATCATTTGATGCATTCCTTGAGAAAAGGAAACCTGCACCAACAATTGCTTCTCCTCTCTCAACCCGAGAAGAATTAACTGGTGAATCAACTCCTGGAAGGCCTGAAAACAGTGCTACCTCAACGACAAAGAACTCTGAAGAGTCTCATGGCAAGAGTACTTCCAACAACCCTAAATCTTTTGGTTCGGCTAGTGCCAATGGAGCTTCGTCTAGTTCAGATCAAGATGTGTGGTCTGCTGTTCAGGAAAGAGCACTGGTCCAGGCTCTGAAAGCTTTCCCTAAGGAAACTAACCAGAGATGGGAACGAGTTGCGGCTGCTGTTCCAGGGAAGACTCTGAATCAATGCAAGAAAAAATTTGCAATGCTGAAAGAGAATTTCAGAAACAAGAAAAGTGCAGCTTAA 1956 0.4223 MMAKHTNLQLIAYSQEIVDGQPIFVSSNCFPIKASNFEPAGHAFHSAALKLLGVEEDNPDGDDKKVVDDKEQMYFASSDSYSSKSKKKSGAGDKQQDHYALLGLGHLRYLATEDQIRKSYRETALRYHPDKQAALLLGEETEVAKQAKKDEIESHFKAIQEAYEVLIDPVKRRIYDSTDEFDDEIPTDCSPQDFFKVFGPAFMRNGRWSVSQPVPSLGDDNTPLKEVDEFYDFWYAFKNWREFPHADEFDLEQAESRDHRRWMERQNAKLSEKARKEEYARIRALVDNAYKRDPRILRRKEEEKAEKQRKKEAKILAKKLQEEEAARIAEEEKRRKDEEERKAAEAALQQKKVKEKEKKLLRKERTRLRTLAAPVLSERLRDISEDDVESLCLSLDIEELKSLCQMIEGKIISEQAEILRDAHGSKKDADDKKGEKTDKKDGSVSGSGSASLGNTNEKKENPWSKEEIELLRKGMQKYPKGTSRRWEVISEYIGTGRSVEEILKATKTVLLHKPDSSKSFDAFLEKRKPAPTIASPLSTREELTGESTPGRPENSATSTTKNSEESHGKSTSNNPKSFGSASANGASSSSDQDVWSAVQERALVQALKAFPKETNQRWERVAAAVPGKTLNQCKKKFAMLKENFRNKKSAA 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci104g0010 651 SUPERFAMILY Chaperone J-domain 95 203 IPR036869 -
Prci104g0010 651 ProSiteProfiles SANT domain profile. 590 645 IPR017884 -
Prci104g0010 651 MobiDBLite consensus disorder prediction 537 594 - -
Prci104g0010 651 MobiDBLite consensus disorder prediction 508 594 - -
Prci104g0010 651 Pfam Myb-like DNA-binding domain 594 640 IPR001005 -
Prci104g0010 651 Pfam Myb-like DNA-binding domain 461 502 IPR001005 -
Prci104g0010 651 Gene3D - 455 512 - -
Prci104g0010 651 ProSiteProfiles Myb-like domain profile. 455 510 IPR001005 -
Prci104g0010 651 PRINTS DnaJ domain signature 120 135 IPR001623 -
Prci104g0010 651 PRINTS DnaJ domain signature 151 171 IPR001623 -
Prci104g0010 651 PRINTS DnaJ domain signature 49 67 IPR001623 -
Prci104g0010 651 CDD SANT 595 641 IPR001005 -
Prci104g0010 651 MobiDBLite consensus disorder prediction 443 458 - -
Prci104g0010 651 Pfam DnaJ domain 97 176 IPR001623 -
Prci104g0010 651 SUPERFAMILY Homeodomain-like 461 504 IPR009057 -
Prci104g0010 651 CDD SANT 462 502 IPR001005 -
Prci104g0010 651 MobiDBLite consensus disorder prediction 422 467 - -
Prci104g0010 651 ProSiteProfiles dnaJ domain profile. 97 179 IPR001623 -
Prci104g0010 651 SMART dnaj_3 96 171 IPR001623 -
Prci104g0010 651 FunFam Myb family transcription factor 589 649 - -
Prci104g0010 651 Gene3D DnaJ domain 80 190 IPR036869 -
Prci104g0010 651 SMART sant 459 511 IPR001005 -
Prci104g0010 651 SMART sant 591 643 IPR001005 -
Prci104g0010 651 ProSitePatterns Nt-dnaJ domain signature. 156 175 IPR018253 -
Prci104g0010 651 CDD DnaJ 97 168 IPR001623 -
Prci104g0010 651 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 3 650 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Prci104g0010 651 MobiDBLite consensus disorder prediction 422 442 - -
Prci104g0010 651 SUPERFAMILY Homeodomain-like 593 648 IPR009057 -
Prci104g0010 651 Gene3D - 585 651 - -
Prci104g0010 651 Coils Coil 297 366 - -
Prci104g0010 651 ProSiteProfiles Myb-like domain profile. 587 641 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci104g0010 98 297 C2H2 Transcription Factor Family AT1G74250 28.870 4.19e-18 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci104g0010 DnaJ 1.5e-17 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci104g0010 K09522 - gmx:100806665 868.611