Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci104g0001 ATGTCTGATATTAACATAAATGTTTCGGCGACTTACAAGCAAGAAGTGATCTACAAGGAGTGTCTGCATAACCATGCAGCCTCTCTCGGCCTTGTAGCCAACGATGGTTGCTATGAGTTTCTCAAACCTAACACAAACAACACCGTTGACGGTGACCCCCAGCATGAGTTTCTCTGTGCAGTTTGCAAATGCCACCGGAACTTTCATCGGAAAGAAGTTATCTATACTCCTATCATGCAAATCCTCCACCACCACCAGCAACCAACTTTCCGGCAAGACGTGGAGGATCGCCAGCAAATGTCGATGTTAACAATAACAACAACATCGCAGGACGGAGGAAGAGGAAGAAGAGGAACGATGTTCACGGCCAGAGCAACAGAGCCGAATGGGGGATTTTCGCTGAAAGGGATCAGTCGTAGAATGTTCATTGTATGGGTCAACAATAACCGGCGAAGGATGAACCAGGATCAAGCCGCGGCTGCCGCCGTCGCCGTGTGA 498 0.488 MSDININVSATYKQEVIYKECLHNHAASLGLVANDGCYEFLKPNTNNTVDGDPQHEFLCAVCKCHRNFHRKEVIYTPIMQILHHHQQPTFRQDVEDRQQMSMLTITTTSQDGGRGRRGTMFTARATEPNGGFSLKGISRRMFIVWVNNNRRRMNQDQAAAAAVAV 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci104g0001 165 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 13 151 - -
Prci104g0001 165 Pfam ZF-HD protein dimerisation region 16 73 IPR006456 -
Prci104g0001 165 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 18 73 IPR006456 -
Prci104g0001 165 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 18 72 IPR006456 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci104g0001 5 88 ZF-HD Transcription Factor Family AT2G02540 39.785 4.81e-15 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Prci104g0001 ZF-HD_dimer 4.3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci104g0001 - - pcin:129295411 332.413