Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1049g0001 ATGGAGTCCAGTGATCCGATCCCAAACATTCCAAGTCCTTCTTCTTCCGTACCTCTCTCTAACTCTCCTTCCCCCTCGTCTTCACCTCCACAAGTGGTCGTAAGCCCTTGTGCCGCCTGTAAAATTTTAAGGCGTAGATGTGCTGAGAAATGCGTTCTCGCTCCCTATTTCCCTCCTTCTGAACCTGCCAAGTTCACCATTGCTCACAGAGTCTTCGGCGCCAGCAACATCATCAAGTTCTTGCAGGAACTTCCAGAGTCGCAGAGAGCTGATGCAGTGAGCAGCATGGTGTACGAGGCGAGTGCAAGAATAAGAGACCCAGTGTACGGGAGTGCAGGTGCGATTTGCCAGCTTCAGAAGCAAGTGAACGAGCTTCAAGCTCAATTGGCGAAGGCCCAAGCGGAACTTGTGAACATGCAAATGCAACAAGCCAATCTGGTGGCTATCCTCTGCATGGAAATGGCTCAGACTACTCAGACTCAAACTCAAGCGGCGTCTCCTACTTTAACTCCTCACGAATATTCTTCGCCGCCATCATCGTCATTTGAAGATACGAACTTCATTACTTCAAGCAACCTCAACTTCTTCGCGGAAAGCACTGGCCTTAACGCTTTGTGGGAGCAGCCACTCTGGACATGA 639 0.5023 MESSDPIPNIPSPSSSVPLSNSPSPSSSPPQVVVSPCAACKILRRRCAEKCVLAPYFPPSEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAELVNMQMQQANLVAILCMEMAQTTQTQTQAASPTLTPHEYSSPPSSSFEDTNFITSSNLNFFAESTGLNALWEQPLWT 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1049g0001 212 MobiDBLite consensus disorder prediction 162 182 - -
Prci1049g0001 212 Pfam Lateral organ boundaries (LOB) domain 36 133 IPR004883 -
Prci1049g0001 212 MobiDBLite consensus disorder prediction 1 33 - -
Prci1049g0001 212 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 35 173 - -
Prci1049g0001 212 Coils Coil 115 142 - -
Prci1049g0001 212 ProSiteProfiles LOB domain profile. 35 136 IPR004883 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1049g0001 31 212 AS2 family AT1G07900 61.957 5.56e-75 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci1049g0001 LOB 4.7e-41 No_clan