Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1041g0001 ATGGCGGTGGAGCTCATGGGGTTTCCGAAAATGGACGAGCAGACGGCAATTCAGGAGGCTGCATCGGAGGGATTGAAGGGCATGGAGAATCTAATCCGTCTTCTCAACCACAAGCCCAATCTCGTAGACTGCTCTGATCTCACCGATGTTACTGTTTCTAAGTTCAAGAAACTCATTTCTCTTCTAAATCGCACCGGCCATGCCCGGTTCAGAAGAGCACCGATTCTCTCCTCTTCCAGCTCGTGTCCCCTTTCTACTCCAAAGTTGCCGACGCCATCATCCACTGCGCCCTCGTCGGCCAACATTTCCACACCGCAAATTCCGAATCTATCACCGGCGCAGTTCGCCTCTCCGGCGCCTATCGTAAATCCAGTAACCGTGCATCAGGCTCCGATCAACAACAGCACTGCTCCATCCGGTTTCGTTCCGGCTCAGTCACAGTCTCTGACTCTCGATTTCACAAAACCTAATATATTGAGCTCCAACACGAAGTCTCTAGAGCTCGAGTTCTCTAAGGAAACCTTCAGCGTGTCTTCAAACTCATCGTTCATGTCGTCGGCCATCACCGGCGACGGTAGCGTATCGAACGGCAAACAAGGATCGTCGATCTTCCTTACACCGGCGGCACCAACGGTCTCAGGCAGCGGGAGGCCACCCCTCTCGACCGTACCGACGAAGAAGAGATGCCACGACCACCGCGAGCACTCCGATGACCTCTCCGGCTCCAGCAAGTGCCACTGCGCAAAGAGAAGGAAGAATCGGACGAAGAAGGTGGTGAGAGTGCCGGCGATTAGTTCGAAGATTGCCGATATTCCGCCGGACGAGTACTCGTGGAGGAAGTACGGTCAGAAGCCGATCAAGGGGTCGCCATATCCAAGGGGTTACTATAAGTGCAGCACGGTGAGAGGGTGTCCGGCGAGGAAGCACGTGGAGAGGGCCCCAGATGATCCGGCGATGCTGATCGTAACCTACGAGGGGGAGCACCGTCACGCGTTGCAGGCCGCGATGCAGGATAACGGAGCCGGGGGTGTTGGGTTAGTCTTCCAGTCAACGTGA 1056 0.5549 MAVELMGFPKMDEQTAIQEAASEGLKGMENLIRLLNHKPNLVDCSDLTDVTVSKFKKLISLLNRTGHARFRRAPILSSSSSCPLSTPKLPTPSSTAPSSANISTPQIPNLSPAQFASPAPIVNPVTVHQAPINNSTAPSGFVPAQSQSLTLDFTKPNILSSNTKSLELEFSKETFSVSSNSSFMSSAITGDGSVSNGKQGSSIFLTPAAPTVSGSGRPPLSTVPTKKRCHDHREHSDDLSGSSKCHCAKRRKNRTKKVVRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPAMLIVTYEGEHRHALQAAMQDNGAGGVGLVFQST 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1041g0001 351 MobiDBLite consensus disorder prediction 78 102 - -
Prci1041g0001 351 SMART WRKY_cls 272 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1041g0001 351 MobiDBLite consensus disorder prediction 224 245 - -
Prci1041g0001 351 MobiDBLite consensus disorder prediction 190 220 - -
Prci1041g0001 351 ProSiteProfiles WRKY domain profile. 267 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1041g0001 351 Pfam Plant zinc cluster domain 226 270 IPR018872 -
Prci1041g0001 351 Pfam WRKY DNA -binding domain 274 330 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1041g0001 351 Gene3D WRKY domain 260 332 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci1041g0001 351 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 335 IPR044810 GO:0003700
Prci1041g0001 351 FunFam WRKY transcription factor 65 256 333 - -
Prci1041g0001 351 MobiDBLite consensus disorder prediction 190 245 - -
Prci1041g0001 351 SUPERFAMILY WRKY DNA-binding domain 270 332 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1041g0001 1 350 WRKY Transcription Factor Family AT2G24570 58.726 1.55e-122 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci1041g0001 WRKY 9.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1041g0001 - - qsa:O6P43_019342 449.899