LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1030g0002	ATGGAACTGGATGAAAAACCTGTCATTGAGCTCGACGGACCACCCGCAGGAGACGTTGGCGGTGGTGGAGACGGCGGTAGTGGCGATGAGGGTTTAACGGCGTTAGGTGACGGAGGTGGGAGTAGCTCTCAGGGTGCTAGAGACAGAGTAAAGGGTCCTTGGTCTCCAGAGGAGGACGCTATTCTGAGTCGACTTGTTAGCAAGTTCGGGGCCCGAAATTGGAGCTTAATTGCTCGCGGGATCGCTGGAAGATCCGGCAAGTCTTGCCGGCTCCGATGGTGTAATCAACTCGACCCAGCTGTGAAGCGCAAGCCCTTTACTGATGAGGAGGATCGGATCATAGTTGCAGCACATGCAATCCATGGGAACAAATGGGCAGCCATAGCCAGACTTCTACCAGGAAGAACAGATAATGCCATTAAGAATCATTGGAATTCTACTTTGAGGCGTCGGGGAATAGAACTTGATAAAGTTAAATTAGAAGCTTGCAACATGGTGGAAGATGTTAGCTTGGAGAAAGCAAAAGCATCATCAGAAGAAACCCAGTCATGTGGGGATGTTAATTCCTTGAGATCCTCGGAAGGAAGAGATGTCAGTTCTGTGGAGAATATGGAGGATAAATATGAAGACAGGGCACAGACAGAGAGTCAAATGAACCATGCAGTCAAGGATTCGCCTACTCTTTTCCGTCCTCGAGCGCGTATTAGTGCTTTTAGTTTATATACATTGGATGGTTCACAACCTGCATCTTCTACCTCTAGGCAAGTTCCAATGCAAGGACCTCTTTTTCAAGCATCCAAGCCTGGTATTGAAATTTGTAAAATGCTGGATGGAATTTATGGCTGTGACCTATCTGTGCCTAACCACTGTAGCCATGGTTGTTGCACTGATCTAAGTGGTGAAAATGCCAAGAGCTCCTTGTTGGGGCCAGAATTTATTGAATTTTCAGAGGCCCCATCATTCCCGAGTTTTGAGTTGGCAGCCATAGCTACAGACATCAGTAACCTTGCTTGGTTGAAAAGTGGATTGGAGAATAGTAGTGTCAAAATGATGGGTGACTCGGCCGGTAGGGTGGTATCTCACGGATCTCAAGTGAATATTGGCCACTAA	1110	0.4739	MELDEKPVIELDGPPAGDVGGGGDGGSGDEGLTALGDGGGSSSQGARDRVKGPWSPEEDAILSRLVSKFGARNWSLIARGIAGRSGKSCRLRWCNQLDPAVKRKPFTDEEDRIIVAAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLRRRGIELDKVKLEACNMVEDVSLEKAKASSEETQSCGDVNSLRSSEGRDVSSVENMEDKYEDRAQTESQMNHAVKDSPTLFRPRARISAFSLYTLDGSQPASSTSRQVPMQGPLFQASKPGIEICKMLDGIYGCDLSVPNHCSHGCCTDLSGENAKSSLLGPEFIEFSEAPSFPSFELAAIATDISNLAWLKSGLENSSVKMMGDSAGRVVSHGSQVNIGH	369

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1030g0002	369	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	98	152	IPR017930	-
	Prci1030g0002	369	Pfam	Myb-like DNA-binding domain	54	111	-	-
	Prci1030g0002	369	MobiDBLite	consensus disorder prediction	1	54	-	-
	Prci1030g0002	369	Gene3D	-	50	102	-	-
	Prci1030g0002	369	SUPERFAMILY	Homeodomain-like	48	144	IPR009057	-
	Prci1030g0002	369	PANTHER	MYB PROTEIN-RELATED	51	205	-	-
	Prci1030g0002	369	ProSiteProfiles	Myb-like domain profile.	98	148	IPR001005	-
	Prci1030g0002	369	MobiDBLite	consensus disorder prediction	177	203	-	-
	Prci1030g0002	369	ProSiteProfiles	Myb-like domain profile.	46	97	IPR001005	-
	Prci1030g0002	369	Gene3D	-	105	151	-	-
	Prci1030g0002	369	CDD	SANT	53	95	IPR001005	-
	Prci1030g0002	369	MobiDBLite	consensus disorder prediction	177	197	-	-
	Prci1030g0002	369	SMART	sant	102	150	IPR001005	-
	Prci1030g0002	369	SMART	sant	50	99	IPR001005	-
	Prci1030g0002	369	FunFam	MYB transcription factor	51	102	-	-
	Prci1030g0002	369	FunFam	Transcription factor MYB44	105	151	-	-
	Prci1030g0002	369	CDD	SANT	105	148	IPR001005	-
	Prci1030g0002	369	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	46	97	IPR017930	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1030g0002	40	369	MYB Transcription Factor Family	AT3G09230	49.118	4.17e-101	303

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB	Prci1030g0002		Myb_DNA-bind_6	1.1e-15	CL0123

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1030g0002	K09422		-	gmx:100811740	525.013