Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1024g0003 ATGGGAGCATCTCTCCAAACATTCCCTCCTCAAGAACTTCAGTTACAGAAACAAGAATCATGCAACAGAGAGGTGGGATCATCTTCAAAAAGCAGTAAATTTTCTGCATTTGAGTCTGCAGAGCATGAACAACATAGGATTCCTCCCATTCGTCCCCCTGAGAAGAGACAACGAGTTCCTTCTGCTTATAACAGGTTCATCAAGGAGGAAATCCAGAGGATTAAGGCTAGTAACCCCGATGTCAGCCACAGGGAGGCGTTTAGCACCGCGGCCAAAAACTGGGCACATTTTCCCCATATTCACATTGGATTAAAGCTGGATGGCAACAAGCAAGCAAAGTTGGACCAGGAAGAGGGAACTCAAAAATCTAATGGCCTATATTGA 384 0.4505 MGASLQTFPPQELQLQKQESCNREVGSSSKSSKFSAFESAEHEQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDVSHREAFSTAAKNWAHFPHIHIGLKLDGNKQAKLDQEEGTQKSNGLY 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1024g0003 127 Gene3D High mobility group box domain 38 122 IPR036910 -
Prci1024g0003 127 Pfam YABBY protein 17 104 IPR006780 GO:0007275
Prci1024g0003 127 PANTHER PROTEIN YABBY 6-RELATED 8 114 IPR006780 GO:0007275
Prci1024g0003 127 MobiDBLite consensus disorder prediction 107 127 - -
Prci1024g0003 127 CDD HMG-box_SF 58 94 - -
Prci1024g0003 127 MobiDBLite consensus disorder prediction 36 53 - -
Prci1024g0003 127 MobiDBLite consensus disorder prediction 1 59 - -
Prci1024g0003 127 SUPERFAMILY HMG-box 48 97 IPR036910 -
Prci1024g0003 127 MobiDBLite consensus disorder prediction 1 35 - -
Prci1024g0003 127 FunFam axial regulator YABBY 5-like 42 100 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1024g0003 1 127 C2C2-YABBY Transcription Factor Family AT1G08465 63.235 5.20e-51 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Prci1024g0003 YABBY 3.3e-40 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1024g0003 K25796 - gmx:100785458 197.593