Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1024g0002 ATGAAAGTAAGTGTTCCATGCAGCAGTTTCTTTAACATAGTGACGGTTCGATGTGGGCACTGTGCTAATTTACTGTCAGTTAACATGGGAGCATCTCTCCAAACATTCCCTCCTCAAGAACTTCAGAAACAAGAATCATGCAACAGAGAGGTGGGATCATCTTCAAAAAGCAGTAAATTTTCTGCATTTGAGTCTGCAGAGCATGAACAACATAGGATTCCTCCCATTCGTCCCCCTGAGAAGAGACAACGAGTTCCTTCTGCTTATAACAGGTTCATCAAGGAGGAAATCCAGAGGATTAAGGCTAGTAACCCCGATGTCAGCCACAGGGAGGCGTTTAGCACCGCGGCCAAAAACTGGGCACATTTTCCCCATATTCACATTGGATTAAAGCTGGATGGCAACAAGCAAGCAAAGTTGGACCAGGAAGAGGGAACTCAAAAATCTAATGGCCTATATTGA 462 0.4437 MKVSVPCSSFFNIVTVRCGHCANLLSVNMGASLQTFPPQELQKQESCNREVGSSSKSSKFSAFESAEHEQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDVSHREAFSTAAKNWAHFPHIHIGLKLDGNKQAKLDQEEGTQKSNGLY 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1024g0002 153 MobiDBLite consensus disorder prediction 45 87 - -
Prci1024g0002 153 MobiDBLite consensus disorder prediction 45 61 - -
Prci1024g0002 153 FunFam axial regulator YABBY 5-like 68 126 - -
Prci1024g0002 153 SUPERFAMILY HMG-box 74 123 IPR036910 -
Prci1024g0002 153 CDD HMG-box_SF 84 120 - -
Prci1024g0002 153 MobiDBLite consensus disorder prediction 62 79 - -
Prci1024g0002 153 Gene3D High mobility group box domain 64 148 IPR036910 -
Prci1024g0002 153 PANTHER PROTEIN YABBY 6-RELATED 2 140 IPR006780 GO:0007275
Prci1024g0002 153 Pfam YABBY protein 2 130 IPR006780 GO:0007275
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1024g0002 1 153 C2C2-YABBY Transcription Factor Family AT1G08465 64.024 1.06e-65 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Prci1024g0002 YABBY 4.1e-55 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1024g0002 K25796 - tcc:18590164 247.669