Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1024g0001 ATGAAAGTAAGTGTTCCATGCAGCAGTTTCTTTAACATAGTGACGGTTCGATGTGGGCACTGTGCTAATTTACTGTCAGTTAACATGGGAGCATCTCTCCAAACATTCCCTCCTCAAGAACTTCAGTTACAGAAACAAGAATCATGCAACAGAGAGGTGGGATCATCTTCAAAAAGCAGTAAATTTTCTGCATTTGAGTCTGCAGAGCATGAACAACATAGGATTCCTCCCATTCGTCCCCCTGAGAAGAGACAACGAGTTCCTTCTGCTTATAACAGGTTCATCAAGGAGGAAATCCAGAGGATTAAGGCTAGTAACCCCGATGTCAGCCACAGGGAGGCGTTTAGCACCGCGGCCAAAAACTGGGCACATTTTCCCCATATTCACATTGGATTAAAGCTGGATGGCAACAAGCAAGCAAAGTTGGACCAGGAAGAGGGAACTCAAAAATCTAATGGCCTATATTGA 468 0.4423 MKVSVPCSSFFNIVTVRCGHCANLLSVNMGASLQTFPPQELQLQKQESCNREVGSSSKSSKFSAFESAEHEQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDVSHREAFSTAAKNWAHFPHIHIGLKLDGNKQAKLDQEEGTQKSNGLY 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1024g0001 155 MobiDBLite consensus disorder prediction 48 87 - -
Prci1024g0001 155 CDD HMG-box_SF 86 122 - -
Prci1024g0001 155 MobiDBLite consensus disorder prediction 64 81 - -
Prci1024g0001 155 MobiDBLite consensus disorder prediction 48 63 - -
Prci1024g0001 155 FunFam axial regulator YABBY 5-like 70 128 - -
Prci1024g0001 155 SUPERFAMILY HMG-box 76 125 IPR036910 -
Prci1024g0001 155 Gene3D High mobility group box domain 66 150 IPR036910 -
Prci1024g0001 155 Pfam YABBY protein 2 132 IPR006780 GO:0007275
Prci1024g0001 155 PANTHER PROTEIN YABBY 6-RELATED 2 142 IPR006780 GO:0007275
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1024g0001 1 155 C2C2-YABBY Transcription Factor Family AT1G08465 63.415 3.95e-67 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Prci1024g0001 YABBY 1.5e-57 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1024g0001 K25796 - tcc:18590164 246.899