Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci101g0002 ATGAGCTTCACCGACCAGATTCATCAAAACCAAAGTCATAAAGATCACCATCAAGATCCCTGCCTCCATGCCTTGATCCAAACATGTGGACACACATGCACTGCCGTGTTAAACGCAGCCTGTGATCTGAACCTCTTTGATATCATCGCAAAGGGAAGCCCAAACAATGGCGGTGGCCTGATTACCGTGTCTGAGATTGCTTCTCAGCTTCCTGTTCCCATGTCTAAGGTGTCCACGTCAAAACTCGACCGCGTGCTTCGTTTTCTGGTGAGTTTCTCAGTCCTCACCTGCTCTGCTCGCTCTAACGAAGAAGACGGAAGCATGGAGAAGCTGTACGGACTCTCCCCCACCGGAAAATACTTCCTCAAGAAACAAGACGGTACTCCTGCCTGGGCTTCCTTGTTCCCCAAGCTTTCTTACCACCCGTACATGGCTCGAGTCTGGCTACACTGCAAGGAGGCGGTCCTGGACGGAGGAGTGGACATATTTAAGAAATTGAATGGACAGAGAATGTACGAGTACGTGGAGAAGGATGTAGAGCTGAAGAACTTGTTTCAGAGGACAATGGCAGAAATATCTGCACTGCACATGGAAAAGATTCTGGAAGTGTACAAAGGCTTCGAAGGAATATCTCAGCTCGTGGACGTGGCTGGTGGTATTGGTCAGAGCCTCATGATGATCATCTCCAAGTATCCTTCTTTACATGGTGTTAATTTTGACCTGCCGCGTGTTGTCCAAGACGCCCCTCACTTCCCAGGACTGACACATGTAGGAGGGGACATGTTCAAGAGTGTTCCGGAAGGAGAAGCTATAATGATCAAGGGAACAACTCATAACTGGTCGGACGAGAAGTGCGTGCTACTGTTTAGGAATTGCCGCGAAGCATTGAAGGAAGGTGGAAAGGTGATAGTAATAGACCTGATGATGCCACAAGATCCAGAAATGACCATGTCTGCAAAATATCTGAGCCTCCTTGACTCTGTCATGTTGCTGCAAGGAGGTGGAATGGAAAGAACTGAGAAGGAGTTTGAGATTCTGTGCAAGAGAGCTGGCTTTTCTCGCTTCAACCTTGCTTGTCGTGCTTTGTCCAATGTCTTAGGAGTCATGGAATTTTATAAATAA 1122 0.4777 MSFTDQIHQNQSHKDHHQDPCLHALIQTCGHTCTAVLNAACDLNLFDIIAKGSPNNGGGLITVSEIASQLPVPMSKVSTSKLDRVLRFLVSFSVLTCSARSNEEDGSMEKLYGLSPTGKYFLKKQDGTPAWASLFPKLSYHPYMARVWLHCKEAVLDGGVDIFKKLNGQRMYEYVEKDVELKNLFQRTMAEISALHMEKILEVYKGFEGISQLVDVAGGIGQSLMMIISKYPSLHGVNFDLPRVVQDAPHFPGLTHVGGDMFKSVPEGEAIMIKGTTHNWSDEKCVLLFRNCREALKEGGKVIVIDLMMPQDPEMTMSAKYLSLLDSVMLLQGGGMERTEKEFEILCKRAGFSRFNLACRALSNVLGVMEFYK 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci101g0002 373 PANTHER O-METHYLTRANSFERASE 34 364 IPR016461 GO:0008168
Prci101g0002 373 Gene3D Vaccinia Virus protein VP39 130 373 IPR029063 -
Prci101g0002 373 Gene3D - 2 121 IPR036388 -
Prci101g0002 373 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 373 IPR016461 GO:0008168
Prci101g0002 373 Pfam Dimerisation domain 36 90 IPR012967 GO:0046983
Prci101g0002 373 SUPERFAMILY "Winged helix" DNA-binding domain 17 126 IPR036390 -
Prci101g0002 373 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 135 358 IPR029063 -
Prci101g0002 373 FunFam Caffeic acid 3-O-methyltransferase 3 121 - -
Prci101g0002 373 Pfam O-methyltransferase domain 148 353 IPR001077 GO:0008171
Prci101g0002 373 PIRSF O-mtase 1 373 IPR016461 GO:0008168
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci101g0002 37 362 Monolignol Biosynthesis Gene Families AT5G54160 46.341 1.15e-95 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci101g0002 - - qsu:112031144 367.466