Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral996g00008 ATGTCTGTTCAACTCAGCAGGGAAGGTTTAGTGTCTGCTTCTTCTTCATCTTCTTCATGGAACCACAGGCTCAACGACCATACGCACACCCCTTTCCCTCTTCACAAGACCAGCAAAATCGAAGAAAGCGATGAGGATCTGTTCAGAGTGCCGGACATGGAAGCCACGGCGGCCGGTGGCAGCGGAGAGCGTGGAGGAGGAGGAGGGGCTGTTGTTTCAAATGGGAATGCGAGCTTAAGCAATGTGACAGTGACAGTGACAGAAGCTCAGCCTCAGAGTGGAAAACGAAGAAGAGGAAGAAACCCTGCAGATAAAGAGGGCAGACGCCTCAAGAGGTTGTTGAGGAATAGGGTATCAGCACAGCAGGCAAGAGAAAGGAAGAAGGTGTATGTGAATGAGTTGGAAGCGAAGGCTAAGGAGTTGCAAGACAAGAATTACAAGTTGGAAGAGCGTATCTCTACTGTGATCAATGAGAACACCATGCTTCGTAAGGTTCTTATGAACACAAGGCCTAAAGTTGATGAAAGCAGTGAACCAAAGCAGGATCAATTAAGTAAAAGTTAA 564 0.477 MSVQLSREGLVSASSSSSSWNHRLNDHTHTPFPLHKTSKIEESDEDLFRVPDMEATAAGGSGERGGGGGAVVSNGNASLSNVTVTVTEAQPQSGKRRRGRNPADKEGRRLKRLLRNRVSAQQARERKKVYVNELEAKAKELQDKNYKLEERISTVINENTMLRKVLMNTRPKVDESSEPKQDQLSKS 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral996g00008 187 MobiDBLite consensus disorder prediction 93 109 - -
Pral996g00008 187 MobiDBLite consensus disorder prediction 28 51 - -
Pral996g00008 187 Pfam bZIP transcription factor 105 164 IPR004827 GO:0003700|GO:0006355
Pral996g00008 187 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 106 169 IPR004827 GO:0003700|GO:0006355
Pral996g00008 187 CDD bZIP_HY5-like 118 159 - -
Pral996g00008 187 MobiDBLite consensus disorder prediction 73 92 - -
Pral996g00008 187 MobiDBLite consensus disorder prediction 167 187 - -
Pral996g00008 187 SMART brlzneu 104 168 IPR004827 GO:0003700|GO:0006355
Pral996g00008 187 MobiDBLite consensus disorder prediction 1 26 - -
Pral996g00008 187 MobiDBLite consensus disorder prediction 168 187 - -
Pral996g00008 187 SUPERFAMILY Leucine zipper domain 108 167 IPR046347 GO:0003700|GO:0006355
Pral996g00008 187 Coils Coil 120 158 - -
Pral996g00008 187 Gene3D Single helix bin 127 168 - -
Pral996g00008 187 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 111 126 IPR004827 GO:0003700|GO:0006355
Pral996g00008 187 MobiDBLite consensus disorder prediction 1 109 - -
Pral996g00008 187 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 14 183 IPR044280 GO:0000981|GO:0045944
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral996g00008 Pral-Chr996 49734 52909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral996g00008 65 176 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 58.929 1.28e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral996g00008 bZIP_1 1.4e-11 CL0018