Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral995g00005 ATGGCTTCTTCTAGTGGAACGTCTTCCGGGTCATCATCCCTGGTTCGAAACTCTGGTTCAGATGAGGATTTGCAGGTCTTGATGGATCAGAGGAAGAGAAAGAGGATGATATCGAATCGTGAATCGGCGAGAAGATCGAGAATGAGAAAACAGAAGCATCTGGATGATCTGGCGGCTCAGGTGTCTCAGCTCAGGAAGGAGAATCATCAGATTCTCACAAGCGTAAACCTCACAACCCAACAATATCTCACCGTCGAGGCTGAGAATTCTGTGCTCAGAGCCCAAATGAACGAGCTGACCCACAGATTGCAATCTCTGAACGAAATTGTGGATTTCGTCAACACAAGTTCTGCAGTTTTTGCAGCTTCAAACTCATCATCATCATCCACCTTCATGGAATCCACCAACAGCTTCTTCTTCAACAGCCCATTAAACATGGCCACCTGCCTGAACCACCCGATCATGGCTTCTCCTGACATGTTCCAGTACTGTTAA 495 0.4687 MASSSGTSSGSSSLVRNSGSDEDLQVLMDQRKRKRMISNRESARRSRMRKQKHLDDLAAQVSQLRKENHQILTSVNLTTQQYLTVEAENSVLRAQMNELTHRLQSLNEIVDFVNTSSAVFAASNSSSSSTFMESTNSFFFNSPLNMATCLNHPIMASPDMFQYC 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral995g00005 164 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Pral995g00005 164 Coils Coil 89 109 - -
Pral995g00005 164 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Pral995g00005 164 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Pral995g00005 164 MobiDBLite consensus disorder prediction 1 52 - -
Pral995g00005 164 PANTHER BZIP TRANSCRIPTION FACTOR 44 6 158 - -
Pral995g00005 164 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Pral995g00005 164 Pfam bZIP transcription factor 31 82 IPR004827 GO:0003700|GO:0006355
Pral995g00005 164 Gene3D - 29 84 - -
Pral995g00005 164 MobiDBLite consensus disorder prediction 1 24 - -
Pral995g00005 164 FunFam BZIP transcription factor 29 81 - -
Pral995g00005 164 Coils Coil 47 67 - -
Pral995g00005 164 MobiDBLite consensus disorder prediction 25 52 - -
Pral995g00005 164 SUPERFAMILY Leucine zipper domain 31 83 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral995g00005 Pral-Chr995 40134 41684 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral995g00005 27 163 bZIP Transcription Factor Family AT4G34590 57.664 5.85e-51 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral995g00005 bZIP_1 7e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral995g00005 K25786 - gmx:100101862 194.126