Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral992g00001 ATGTTGAAAGGCCTGATTTCTTACAATTATAAGGATTTGAAGTTTGCAACTCAGAATTTTAGTGAAGAAACTAAACTAGGAGAAGGAGGATTTGGTGCTGTATATAAGGGCACTCTAAGGGATGGGAAAGTGGTTGCAGTCAAGAAGTTAACTTTACTCCACTCCAAGAAGATAGAGGAAGATTTTTTGAGTGAAGTGATGCTTATCAGTGATGCTCATCATCCGAATCTTATTCAACTTTTGGGATGGTGTAGTAAAGGCCGTGACAGAATCCTTGTATATGAATACATGAAGAACAATAGTTTGGACAGATTCATATTTGGTGAAAAGAAAGGTCATCTCAACTGGGAGCAGCGATACGCTATAATTTTGGGAATAGCAAGAGGCTTAACTTATCTCCATGAGCAATTTCAAGTCTGTATCATACACAGAGATATAAAGACCAACAACATTCTCTTAGATGATGATTTACAACCTAAAATTGCTGATTTTGGATTGGCAAGATTTTTACCTGAGGACAAATCTCATCTTAGTACAAAATTCGTGGGAACATTAGGATACACAGCACCAGAATATGCAATTCATGGTCAATTATCAGAGAAGGTTGATATTTACAGTTTTGGTATTGTACTCCTTGAAATCATTACTGGCCAGAAAAGCAAAGCATTCAAGGATCATGGTGATGCTGAAGATGAATTCCTCCTACCAAAAGTTTGGAAACTATATGAGAGAGGCATGCACTTAGAGTTGGTAGATCAGGCCTTGGACCTTACTGACTCCGAAGCAGAAAAAGTGAAGAAAGTCATAGAGATTGGTTTGCTTTGCACCCAAGCTTTTGCTGATTTAAGGCCAACAATGTCTGAAGTGATTGATTTGCTCCAAAACAGTGGCTTATCGCATATGAGACCCTCTATGCCCGCTTGGAAGCTATATGGGAGAGGCATACACATAGAGTTGGCGGATGATACCTTGGATCCTTATGATTATAATGCCGCCGAAGTGCAGAGAATTATAGAGATTGGTCTGCTTTGCACCCAAGCACCTGCTGAATTAAGGCCATCAATGTCTGAAATAATTGCTTTGCTCCAAGAAAAGTCCCACGCTGCTTGCTCTGAAACTGTTGCTCATCAAGCATGGATTGACGCAGGCAGTTTTCCAGTTATGCAACATAAACAGTATTTTTGA 1185 0.3949 MLKGLISYNYKDLKFATQNFSEETKLGEGGFGAVYKGTLRDGKVVAVKKLTLLHSKKIEEDFLSEVMLISDAHHPNLIQLLGWCSKGRDRILVYEYMKNNSLDRFIFGEKKGHLNWEQRYAIILGIARGLTYLHEQFQVCIIHRDIKTNNILLDDDLQPKIADFGLARFLPEDKSHLSTKFVGTLGYTAPEYAIHGQLSEKVDIYSFGIVLLEIITGQKSKAFKDHGDAEDEFLLPKVWKLYERGMHLELVDQALDLTDSEAEKVKKVIEIGLLCTQAFADLRPTMSEVIDLLQNSGLSHMRPSMPAWKLYGRGIHIELADDTLDPYDYNAAEVQRIIEIGLLCTQAPAELRPSMSEIIALLQEKSHAACSETVAHQAWIDAGSFPVMQHKQYF 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral992g00001 394 PIRSF ILK 7 313 - -
Pral992g00001 394 PIRSF ILK 324 383 - -
Pral992g00001 394 FunFam serine/threonine-protein kinase PBS1-like 2 96 - -
Pral992g00001 394 SUPERFAMILY Protein kinase-like (PK-like) 6 293 IPR011009 -
Pral992g00001 394 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 307 373 - -
Pral992g00001 394 CDD STKc_IRAK 26 295 - -
Pral992g00001 394 FunFam Cysteine-rich receptor-like protein kinase 2 97 301 - -
Pral992g00001 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Pral992g00001 394 Gene3D Transferase(Phosphotransferase) domain 1 97 307 - -
Pral992g00001 394 Gene3D Phosphorylase Kinase; domain 1 1 96 - -
Pral992g00001 394 ProSiteProfiles Protein kinase domain profile. 20 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral992g00001 394 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Pral992g00001 394 SMART serkin_6 20 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral992g00001 394 Pfam Protein kinase domain 21 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral992g00001 Pral-Chr992 18389 25269 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral992g00001 307 363 Receptor kinase-like Gene Family AT1G56120 47.368 4.86e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral992g00001 Pkinase 3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral992g00001 - - pcin:129300016 496.123