Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral991g00019 ATGTATCACCATCACCAACACCAAGGAAAGAACATCCATTCTTCTTCTTCCAGAATGCCAATCTCAGCTGAGAGGCACATGTTCCTTCAAACTGGAAATGGCTCTGGTGATTCTGGACTTGTCCTCTCCACTGATGCTAAACCCAGATTGAAATGGACAGCAGATCTACATGCCAGGTTTATAGAAGCGGTCAATCAGCTAGGCGGAGCTGACAAGGCTACTCCTAAGACAGTAATGAAGCTCATGGGGATTCCAGGGCTCACTTTGTATCATCTAAAGAGCCATCTTCAGAAGTATAGATTGAGCAAGAATCTGCATGGACAAAGTAACAACGTGACACACAAAATCACAATTAATGCAGGTGCAGCAACGGGGGAAAGACTTCCTGAAACAGGTGGAACTCATATGAATAATCTAAACCTCTCGCCACAGGCTAACAAAGATTTACACATAAGCGAGGCCCTGCAGATGCAGATTGAGGTGCAGAGAAGGCTAAATGAACAACTTGAGGTACAGAGACACTTGCAGCTTCGCATAGAGGCCCAAGGGAAATACCTGCAGGCTGTGCTTGAGAAAGCTCAAGAAACACTTGGTAGACAGAATTTAGGGATGGTGGGACTTGAAACAGCAAAAGTTCAACTCTCAGAGCTTGTATCCAAAGTATCTTCTCAGTGCTTGAGTTCTGCTTTTTCAGAACTGAAGGAGCTACAAGGATTCTACCCACAGCAAACACAAAACAACCAGCCAACCGACTGCTCAATGGACAGCTGCCTCACATCCTGCGATGGATCTCAAAAGGAACAAGAAATACAAAATCCAGGGATGGGTTTAAGATCCTTCAATGGCCATACGTTCATGGAAAGAAAGGAAGCCATGGAAGCACCCATCTTGAGGAACTCCGAGCTCAAGTGGCGTGATGAAGTGAAAAAGAACAGCACATTTCTGAGCAACCCATTGGGCAAAACTGCCGAAAGAAGGGGTTATGCTGCAGAAAGAAGTCCCAGTGACTTATCTATGAGCATCGGACTTGAAAGAGAAAGTGAGAATAATGGAAGCAGCATGTTTCCTGAGAGATTAATGATGGGGAGAGAATCAGATGGTGAATTCCCACACCGAAACACAAGTAAGCCAGAATCGACAAAACCACTGCAAGAGAAGGTCCCTCAGGAGTATAGATTGCCTTACTTTGCAGCATCAAGACTCGACCTGAACACCCGTGAAGAAAACGATGCTGCGATGAGCTGCAAACAACTGGATTTGAATGGATTCAGCTGGAGCTGA 1281 0.4536 MYHHHQHQGKNIHSSSSRMPISAERHMFLQTGNGSGDSGLVLSTDAKPRLKWTADLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSNNVTHKITINAGAATGERLPETGGTHMNNLNLSPQANKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGMVGLETAKVQLSELVSKVSSQCLSSAFSELKELQGFYPQQTQNNQPTDCSMDSCLTSCDGSQKEQEIQNPGMGLRSFNGHTFMERKEAMEAPILRNSELKWRDEVKKNSTFLSNPLGKTAERRGYAAERSPSDLSMSIGLERESENNGSSMFPERLMMGRESDGEFPHRNTSKPESTKPLQEKVPQEYRLPYFAASRLDLNTREENDAAMSCKQLDLNGFSWS 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral991g00019 426 NCBIfam myb-like DNA-binding domain, SHAQKYF class 47 102 IPR006447 GO:0003677
Pral991g00019 426 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 104 IPR017930 -
Pral991g00019 426 SUPERFAMILY Homeodomain-like 46 102 IPR009057 -
Pral991g00019 426 Gene3D - 46 104 - -
Pral991g00019 426 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 8 295 IPR044848 GO:0003700
Pral991g00019 426 MobiDBLite consensus disorder prediction 324 385 - -
Pral991g00019 426 MobiDBLite consensus disorder prediction 340 354 - -
Pral991g00019 426 Pfam MYB-CC type transfactor, LHEQLE motif 150 196 IPR025756 -
Pral991g00019 426 FunFam Myb family transcription factor 46 104 - -
Pral991g00019 426 Coils Coil 152 172 - -
Pral991g00019 426 MobiDBLite consensus disorder prediction 361 385 - -
Pral991g00019 426 Pfam Myb-like DNA-binding domain 49 100 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral991g00019 Pral-Chr991 91849 95134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral991g00019 79 426 G2-like Transcription Factor Family AT3G04030 51.003 1.16e-102 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral991g00019 Myb_DNA-binding 1.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral991g00019 - - gmx:100810396 659.062