Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral987g00001 ATGACAACCCAGCGCCTCCTCCTCCTCCTCCTCTTCTCATCCGCATTCTTCTTCCTCCATCCATCCTCTGTCGCCGGAGAATCCTACGCCCGCGGTCCCGCCGACTCTCCCCTCAACTCCACCGATTACATCCGCACGAGCTGCGGCACCACTCTCTATCCTGACGTCTGCTACTCCTCCCTCTCTCGCTACGCCAATGCCGTCCAGCAGAATCCCGGCCAGCTTGCTCGAGTCGCCATCGCCCTCAGCCTCTCCAAGGCTCACCGAATGGCCTCCTACATCTCCAACCTCACTCGCGATGCCGAATACGAAGCCAACTCTCGCGCCTCCTCCGCCCTCCATGACTGCTTCAGCAACGTCGGAGACGCCGTCGACGAAATCCGCGGCTCTCTCAAGCAGATGCGGCAGATTGGGGCCGCCGGCTCCGGCGAGGAGTCGTTCAGGTTCCAGATGAGTAACGTGCAGACGTGGATGAGCGCGGCGCTGACGGACGAGGAGACGTGTACGGACGGCTTCGAGGACGTACCGGACAGTCCGGTGAAGGCAGACGTGTGCGATAAGGTCACGGACTTGAAGAAGTTCACCAGTAACGCCTTAGCGCTGGTAAATAATTACGCTAACACGGGAACGCCTTGA 636 0.6038 MTTQRLLLLLLFSSAFFFLHPSSVAGESYARGPADSPLNSTDYIRTSCGTTLYPDVCYSSLSRYANAVQQNPGQLARVAIALSLSKAHRMASYISNLTRDAEYEANSRASSALHDCFSNVGDAVDEIRGSLKQMRQIGAAGSGEESFRFQMSNVQTWMSAALTDEETCTDGFEDVPDSPVKADVCDKVTDLKKFTSNALALVNNYANTGTP 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral987g00001 211 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 201 - -
Pral987g00001 211 NCBIfam pectinesterase inhibitor domain 27 205 IPR006501 GO:0004857
Pral987g00001 211 SMART PMEI_2 39 201 IPR006501 GO:0004857
Pral987g00001 211 FunFam Pectin methylesterase inhibitor 1 39 205 - -
Pral987g00001 211 Pfam Plant invertase/pectin methylesterase inhibitor 43 201 IPR006501 GO:0004857
Pral987g00001 211 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 205 IPR035513 -
Pral987g00001 211 CDD PMEI-like_3 46 207 - -
Pral987g00001 211 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 205 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral987g00001 Pral-Chr987 8190 16264 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral987g00001 41 201 Carbohydrate Esterase AT5G53370 29.448 2.26e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral987g00001 - - gmx:100812251 306.219