Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral985g00003 ATGCTGGGGGACTCAACTGCGTTGGAAGGTGGGGGCGCTAGCTCTGGAGATGATGCTGCGGCCGCCACCGCTGCTGCTGCAGCATCTGCTGGAGGAGCTGCAGAAGCCCATGACGGCGGTGAGTCAGCAATTGTGGCGGCGGCTGGCGGTGGTGGGGGAGCTGGATCGAATTCAGGCGAAGAGGGTGGTGGTGGGGACAGAAGCTTCGGCGGTAACCGGTGGCCCCGCCAGGAGACTCTGGCGCTCTTGAAGATACGCTCCGACATGGACGTCGCGTTTCGAGATGCCAGCGTTAAGGGTCCCTTGTGGGATGAGGTTTCCAGGAAGTTAGCAGAGCTGGGATACCACAGAAGCGCCAAGAAGTGCAAGGAGAAATTCGAGAACGTTTACAAGTACCACAAGCGAACCAAGGAAGGCCGAACCGGAAAACCATACGGCAAAACGTACCGTTTCTTCGATCAGTTAGAAGCTCTCGATCAGCACCATCATCATCAAAACCATCCTCATAATAATACTAATTCTTTATTGATTCAATCCTCTTCTTCTAATGCCGCTCCTCTACCTGCACCACCAGTCTCCGTCATCCCCACCACCCAACCTCCTCCTTCAGTGATGGTGGCGCCACAAGTAGCACCGCCTTATCCTCCTCCTCCTCATGTTAATGCTTCTACTACTATTCCATCAATGAACACTTCTTCAATCCCTCCATTGTACCCACCCCCACCGGCATCGACGACGACGACCACAGCAAACCCTACTTTTATACCCTCGTTCGCCAGCATACCGACGGATCTCTTGTCCAATTCTAGTTCGTCTTCGACGTCGTCTGATGAGACGATAGAGGCTCGGCGGAAGCGGAAGAGGAAGTGGAAGGACTTCTTCGAGAGGCTGATGAAGGAGGTGATAGAGAAGCAGGAGGAGTTGCAGAAGAGGTTTCTGGAAGCCATAGAGAAACGCGAGCACGAGAGAATGGTTCGGGAGGAGTCCTGGAGAATGCAGGAGATGGCCAGGATCAATAAGGAGAGAGAAATATTGGCGCAGGAAAGATCCATTGCGGCCGCAAAAGACGCTGCTGTTATGGCCTTCTTGCAGAAGATCGCTGAACAGCAGAATCCCGGTCAACCGGCACCGACAACAAATAACATTAGCATTCCCAATCCTCCGTCGCAGCCTACGGCAACTCCCGCACCAGCACCAGCACCAGCGCCTGTAATTGCACCGCCGCCGCCGCAGCCACTCCAACCTGTGACGGTGCAACAATCAACTTCGGTTCTTTCTACTCCACCGCCGGCTCCGCCTCCATCAGCGCAACAAGGTATAACGAGCATGGAAATTGTAATGAAAACTGACAACGGGGATAACAGTAATTTGACGATGCCATCCTCGGCCACGCCGGGTACCTCATCGTCGAGGTGGCCGAAAGTGGAGGTAGAGACGCTGATAAAACTGCGGTCAAACCTGGACGCTAAGTACCAGGAGAATGGGCCGAAAGGGCCGTTGTGGGAGGAAATCTCTGCCGCAATGAGGAAACTGGGGTACAACCGTAGCTCCAAGAGGTGCAAAGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAAGTGAAGGAGAGCAACAAGAGAAGACCAGAAGATTCCAAGACGTGTCCTTACTTTCACCAGCTGGATGCTCTATACAGGGAAAAGAAGTTCAAGTTGCAGTCAGCTCCGCCGCCGCCGCCGGATAACATGTCTACGCCGCTCATGGTGCGCCCAGAGCAGCAGTGGCCGCCGCAACCGCAGACGCAGACGCAGCCGCAGCTGCAAGATACACGGCCGTCGGGGCCCCAGGTGATGATGGGAAGCGCGGGAAATGATGCAATGGAAGAAGAAGATGAGGAGGAAGACAAGGATAGAGAGGAAGAAGATGATGACGACGACGATGATGGAGGAAGTGGTACCTACGAGATAGTGGCAAGCACGCCAGCTACTTCAGTGGGTGCTTCTGAGTGA 1989 0.543 MLGDSTALEGGGASSGDDAAAATAAAAASAGGAAEAHDGGESAIVAAAGGGGGAGSNSGEEGGGGDRSFGGNRWPRQETLALLKIRSDMDVAFRDASVKGPLWDEVSRKLAELGYHRSAKKCKEKFENVYKYHKRTKEGRTGKPYGKTYRFFDQLEALDQHHHHQNHPHNNTNSLLIQSSSSNAAPLPAPPVSVIPTTQPPPSVMVAPQVAPPYPPPPHVNASTTIPSMNTSSIPPLYPPPPASTTTTTANPTFIPSFASIPTDLLSNSSSSSTSSDETIEARRKRKRKWKDFFERLMKEVIEKQEELQKRFLEAIEKREHERMVREESWRMQEMARINKEREILAQERSIAAAKDAAVMAFLQKIAEQQNPGQPAPTTNNISIPNPPSQPTATPAPAPAPAPVIAPPPPQPLQPVTVQQSTSVLSTPPPAPPPSAQQGITSMEIVMKTDNGDNSNLTMPSSATPGTSSSRWPKVEVETLIKLRSNLDAKYQENGPKGPLWEEISAAMRKLGYNRSSKRCKEKWENINKYFKKVKESNKRRPEDSKTCPYFHQLDALYREKKFKLQSAPPPPPDNMSTPLMVRPEQQWPPQPQTQTQPQLQDTRPSGPQVMMGSAGNDAMEEEDEEEDKDREEEDDDDDDDGGSGTYEIVASTPATSVGASE 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral985g00003 662 CDD GT1 470 535 - -
Pral985g00003 662 CDD GT1 72 137 - -
Pral985g00003 662 Pfam Myb/SANT-like DNA-binding domain 72 158 IPR044822 -
Pral985g00003 662 Pfam Myb/SANT-like DNA-binding domain 470 557 IPR044822 -
Pral985g00003 662 SMART sant 70 132 IPR001005 -
Pral985g00003 662 SMART sant 468 530 IPR001005 -
Pral985g00003 662 FunFam Trihelix transcription factor GT-2 74 135 - -
Pral985g00003 662 MobiDBLite consensus disorder prediction 1 73 - -
Pral985g00003 662 ProSiteProfiles Myb-like domain profile. 464 528 IPR001005 -
Pral985g00003 662 MobiDBLite consensus disorder prediction 561 662 - -
Pral985g00003 662 MobiDBLite consensus disorder prediction 381 415 - -
Pral985g00003 662 MobiDBLite consensus disorder prediction 265 284 - -
Pral985g00003 662 ProSiteProfiles Myb-like domain profile. 72 130 IPR001005 -
Pral985g00003 662 FunFam Trihelix transcription factor GT-2 472 533 - -
Pral985g00003 662 MobiDBLite consensus disorder prediction 618 644 - -
Pral985g00003 662 Coils Coil 291 318 - -
Pral985g00003 662 MobiDBLite consensus disorder prediction 580 610 - -
Pral985g00003 662 MobiDBLite consensus disorder prediction 437 473 - -
Pral985g00003 662 PANTHER FI21293P1 42 606 - -
Pral985g00003 662 MobiDBLite consensus disorder prediction 369 473 - -
Pral985g00003 662 Gene3D - 74 135 - -
Pral985g00003 662 Gene3D - 472 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral985g00003 Pral-Chr985 28277 31800 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral985g00003 66 602 Trihelix Transcription Factor Family AT1G76880 54.530 4.72e-171 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pral985g00003 Myb_DNA-bind_4 2.8e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral985g00003 - - pdul:117637144 565.074