Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral982g00002 ATGGGCTGCGTTCAGGCTAAGCCATCGGGGGGTTCGGAAGCTAAGGGCCTAGAGAGGCTGAAACTAGAGAATGGGTATGTTGGAAATGGGGATTTCGCTGCTCATCGACGATCGATGGGCCAGATATATGGCGAATGTGAAGATATTGGTAGGGTGCACCAGCGCGAAATCAGAAAGCATCGGCTTGGGTCTGGTATTGGGAACGAAGAAAGGGAAGGTAGCAGCAACCGCTGGATGGGAGAGGGGAAGAGAAATGCTGTGCATGATGGTGAGAAAATACCAAGGAAATCTTTTGACGATGAGATGGTTGACGGGTGGCCCAGATGGTTAGTTGATAATGTTCCTCGAGAAGTTTTGGCTGGCTTGGTTCCCCGGAGTGCTGAGTCATACGTAATGCTTGACAAGGTAGGACAAGGAACCTACAGCAATGTTTATAAAGCACGAGATCGGGCCACGAGGGAACTTGTGGCCCTTAAGAAGGTTCGCTTTGATAAATCCCAGCCGGAGAGCATTAAATTTATGGCAAGGGAAATTGCGATACTACAGATATTGGATCATCCTAATGTCATAAAACTTAAAGGATTGGCTACATCAAGAATGCAATATAGTATTTATCTTGTTTTTGATTTCATGCAATCAGACTTGGCTAGAATAATATCTCGTCCTGAAGAACGACTCACTGAACCACAGGTCAAGTGCTATATGCATCAATTGCTTTCAGGTCTGCAGCATTGCCACGACAGGGGCATCTTGCACCGAGATATCAAGGGGTCAAATCTCTTGATTGATAAAAATGGAATGCTCAAGATTGCTGATTTTGGGCTTGCCAATTTTTATAACCTAAACCATAACCAGTATCTCACCAACCGGGTTGTGACGCTTTGGTACAGAGCTCCTGAGCTATTGTTAGGTGCCACGAATTATGGAGTTGGTATTGATTTGTGGAGTGCTGGATGCCTCTTGGCAGAAATGTTTATGGGAATTCCAATCATGCCAGGAAGAACAGAGGTTGAGCAACTTCATAGAATTTTCAGGCTATGTGGCACGCCATCAGAGGAGTACTGGAAAAAATTGAATCTTCCCACAACATTTAGACCTCCGAAGACTTACAGACCCAGCCTAGCAGAATCTTTTAGGGATCTCCCTCCATCTTCTGTGGGCCTTGTGTGTACTCTGCTCACATTGGATCCTGCATACCGTGGCACTGCATCTAAAGCTCTTCAAAATCAGTTTTTCTTTACAAGCCCATTGGCACGTGATCTCTCTGGTCTGCCTGTAAGCTACACGGAACATGATGGGCAAAATCTTACCAATGAAGAGATCGAGAATGTGAATGCTAAATTAAGACGATCTCATACCCGTCATGAGAGGCGAAGGAAGAATGTGGCATCCGGCTGGCCAACAGAGCATACTGTATCTTCTAAAGAGGAACTGAGCAAGGAAGTTGAGGCATTTGTTCCTAATGAAGAACAGGGCAGAATCCCCCCAAGCAGTAGGACATCATCTGTTTCTGACACTGCTGAGTCAAAGGATCATCCATCTCCTCTCATTCTTTCTCCAAATTTGGCTTTTGGTGATCAAAAGTTGTCCCACAGAATCCATCGCCATGTTAATGTCAAGAACCTTCCTCCATTACCCAAGTCTAAACAACATGCGTCCAACAAACAAGACAACAACTACGGACCACACCGGATCCTCAGGTCAGCTTCCTCCAGAGAATTTAGAAACCCAAAAAAGGGTGTCTTTGGAATTCATTGA 1758 0.4528 MGCVQAKPSGGSEAKGLERLKLENGYVGNGDFAAHRRSMGQIYGECEDIGRVHQREIRKHRLGSGIGNEEREGSSNRWMGEGKRNAVHDGEKIPRKSFDDEMVDGWPRWLVDNVPREVLAGLVPRSAESYVMLDKVGQGTYSNVYKARDRATRELVALKKVRFDKSQPESIKFMAREIAILQILDHPNVIKLKGLATSRMQYSIYLVFDFMQSDLARIISRPEERLTEPQVKCYMHQLLSGLQHCHDRGILHRDIKGSNLLIDKNGMLKIADFGLANFYNLNHNQYLTNRVVTLWYRAPELLLGATNYGVGIDLWSAGCLLAEMFMGIPIMPGRTEVEQLHRIFRLCGTPSEEYWKKLNLPTTFRPPKTYRPSLAESFRDLPPSSVGLVCTLLTLDPAYRGTASKALQNQFFFTSPLARDLSGLPVSYTEHDGQNLTNEEIENVNAKLRRSHTRHERRRKNVASGWPTEHTVSSKEELSKEVEAFVPNEEQGRIPPSSRTSSVSDTAESKDHPSPLILSPNLAFGDQKLSHRIHRHVNVKNLPPLPKSKQHASNKQDNNYGPHRILRSASSREFRNPKKGVFGIH 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral982g00002 585 MobiDBLite consensus disorder prediction 547 565 - -
Pral982g00002 585 FunFam Putative serine/threonine-protein kinase 213 450 - -
Pral982g00002 585 SUPERFAMILY Protein kinase-like (PK-like) 125 415 IPR011009 -
Pral982g00002 585 MobiDBLite consensus disorder prediction 448 521 - -
Pral982g00002 585 SMART serkin_6 130 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral982g00002 585 CDD STKc_CDK9_like 130 412 - -
Pral982g00002 585 ProSitePatterns Protein kinases ATP-binding region signature. 136 159 IPR017441 GO:0005524
Pral982g00002 585 MobiDBLite consensus disorder prediction 64 87 - -
Pral982g00002 585 Coils Coil 438 458 - -
Pral982g00002 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Pral982g00002 585 ProSiteProfiles Protein kinase domain profile. 130 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral982g00002 585 Gene3D Phosphorylase Kinase; domain 1 120 212 - -
Pral982g00002 585 FunFam probable serine/threonine-protein kinase At1g54610 117 212 - -
Pral982g00002 585 Gene3D Transferase(Phosphotransferase) domain 1 213 446 - -
Pral982g00002 585 MobiDBLite consensus disorder prediction 473 487 - -
Pral982g00002 585 Pfam Protein kinase domain 130 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral982g00002 585 MobiDBLite consensus disorder prediction 493 509 - -
Pral982g00002 585 MobiDBLite consensus disorder prediction 540 585 - -
Pral982g00002 585 PANTHER CELL DIVISION PROTEIN KINASE 128 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral982g00002 Pral-Chr982 9426 14194 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral982g00002 125 457 Core Cell Cycle Gene Families AT5G10270 43.978 2.69e-93 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pral982g00002 Pkinase 9.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral982g00002 K08819 - gmx:100776854 723.776