Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral981g00003 ATGGACTCTTCCTTCCCTTTCCCTGCAGAGATGGACTTCTTCTCTAACAACAATCTCAAGCCTTCCTCTTCCTCTTCCAATGATGATTCCTCCACTCCTCCTCGTCCTCTTGAATTCAAAGTAAACACTGCTCTCAATCTCTTGACCATTGACGGCGACCAATCCGTGGTGGATGGTGCGTTTGACGTATATTCAAATTTCGAAGAGAAACGAGCCAAGATTAGTGAGATTGCTCTTCTTCGAGCTGAGTTAGAGAAGATCATGGAAGAGAATCATGAGCTGAAAGACACTCTGAATAAGGTTAACACCAATTACAATGCCCTGAAGATGCATGTGGACTTTATCGAGTCTCGCAAGGGCAGTGAGGACGCTGAGAAACCCGAAAACCAAGTGCCTGATGATGCGAGTCCAGAAGAAAAGAAACAAACAGATAGTAACAGAGGAACCCTAGTGCCAAGGCAATTTATAGATCTTGGATTAGCTTCGATCAATGATGGTGAGGCTAATAGTGATGAGCCTTCGCTGTCTTCCTCCAATGACAGATCAAGATCGCCATTGGAAGTGGAATGCAGGGCCAGAATTGGTTCTGATAAGAAGGAACTCACCAGAGAAACTGAAATTGAAGAAGCTGACAAGACTAATAAAAAATATAGTCCTCCCAGAAACGTTGATGATCAGCTGGAAGACATTATGAGGAAGGCAAGAGTTGCAGTCAGAGTTCGATCAGAAGCACCTATGATTACTGATGGATGTCAATGGAGAAAATATGGTCAGAAGATGGCCAAAGGAAATCCATGCCCTCGAGCTTATTATCGTTGCACCATGGGTTCGGGTTGTCCCGTTAAGAAACAGGTACAAAGGTGTGCAGAGGATCGAACAATTTTGGTAACAACATATGAAGGAAGTCATAACCACGCATTGCCTCCAGCAGCAATGGCGATGGCTCAAACAACAGCAGCGGCAGCAAGGACATTGCTTTCAGGATCAATGTCAAGCAATGATGGTCTAATGAATGCAAGCTTCTTGACAAGGACGACATTGCTACCTTGTTCTTCAAGTAACATGGCAACTCTCTCAGCCTCAGCTCCATTTCCAACCGTTACATTGGACTTAACTATTCCTCCAACACCACAATCTCCTACCCAATTTCAAATGCCTTTCTCAAATAATGCCCCTCATGATTTCACTCAAGTTTTGGCTCAAGCGCTTTGTAGCAACAAGCAAACAACTATGTCGGGGCTTCAAGTGAATAACAAAGACCCCTTACAATTGAGTGCTGCTATAGCAGCTGATCCTAACTTCACAGCAGCTTTAACAGCGGCTATTACTTCTATTATGGGTTCTACTCTGCCAAACAACGTTAATGGTGACAACAATGCCAAAGTTATAAGTAGCAATAACAGTTATTCAAATTTTTCAGGGAATTAG 1428 0.4342 MDSSFPFPAEMDFFSNNNLKPSSSSSNDDSSTPPRPLEFKVNTALNLLTIDGDQSVVDGAFDVYSNFEEKRAKISEIALLRAELEKIMEENHELKDTLNKVNTNYNALKMHVDFIESRKGSEDAEKPENQVPDDASPEEKKQTDSNRGTLVPRQFIDLGLASINDGEANSDEPSLSSSNDRSRSPLEVECRARIGSDKKELTRETEIEEADKTNKKYSPPRNVDDQLEDIMRKARVAVRVRSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMGSGCPVKKQVQRCAEDRTILVTTYEGSHNHALPPAAMAMAQTTAAAARTLLSGSMSSNDGLMNASFLTRTTLLPCSSSNMATLSASAPFPTVTLDLTIPPTPQSPTQFQMPFSNNAPHDFTQVLAQALCSNKQTTMSGLQVNNKDPLQLSAAIAADPNFTAALTAAITSIMGSTLPNNVNGDNNAKVISSNNSYSNFSGN 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral981g00003 475 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 55 459 IPR044810 GO:0003700
Pral981g00003 475 Gene3D WRKY domain 232 309 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral981g00003 475 SMART WRKY_cls 247 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral981g00003 475 SUPERFAMILY WRKY DNA-binding domain 240 308 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral981g00003 475 Coils Coil 70 104 - -
Pral981g00003 475 FunFam probable WRKY transcription factor 31 232 309 - -
Pral981g00003 475 ProSiteProfiles WRKY domain profile. 242 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral981g00003 475 MobiDBLite consensus disorder prediction 15 36 - -
Pral981g00003 475 MobiDBLite consensus disorder prediction 164 223 - -
Pral981g00003 475 MobiDBLite consensus disorder prediction 118 151 - -
Pral981g00003 475 MobiDBLite consensus disorder prediction 118 146 - -
Pral981g00003 475 Pfam WRKY DNA -binding domain 249 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral981g00003 475 MobiDBLite consensus disorder prediction 167 183 - -
Pral981g00003 475 MobiDBLite consensus disorder prediction 184 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral981g00003 Pral-Chr981 11642 14009 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral981g00003 2 461 WRKY Transcription Factor Family AT1G62300 46.443 4.16e-105 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral981g00003 WRKY 1.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral981g00003 - - pcin:129313060 646.351