Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral980g00001 ATGGCTTCTTCTCCTGGTGGTGGTGCTTCTTCTGCAACTTCATCTGATCATCATCATCAAGAAGATGTGATGGACCAGAAGAAGAGGAAGAGAATGATATCGAACCGCGAGTCGGCGCGGCGATCGAGGATGAAGAAACAGCAGCATCTGGACGATCTGGTGAGGCAGGTTGGTGAGCTGAGGAAGGAGAATGAAGAGATTATGAAGAACTTGAGCTTAACCAGCCAACTTCATATGAACATGGAAGCAGAGAATGCAATCTTGAGGACCCAAATGGCTGAGTTAACAAACAGATTGGAATCTCTTAATGAGATCATAAGTTATATAAACTCATCAAGCAGTTATGTGTTCAATAATGATGATGAGACTGAGATGATCTCTGATTGTGGCCTCTTCAACAATTGGAACCAACCTATCATGGCTGCCGGTGGAAATAATAATATGATGTATTATTGA 456 0.4254 MASSPGGGASSATSSDHHHQEDVMDQKKRKRMISNRESARRSRMKKQQHLDDLVRQVGELRKENEEIMKNLSLTSQLHMNMEAENAILRTQMAELTNRLESLNEIISYINSSSSYVFNNDDETEMISDCGLFNNWNQPIMAAGGNNNMMYY 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral980g00001 151 SUPERFAMILY Leucine zipper domain 27 79 IPR046347 GO:0003700|GO:0006355
Pral980g00001 151 MobiDBLite consensus disorder prediction 15 50 - -
Pral980g00001 151 FunFam BZIP transcription factor 25 76 - -
Pral980g00001 151 Coils Coil 43 70 - -
Pral980g00001 151 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 25 72 IPR004827 GO:0003700|GO:0006355
Pral980g00001 151 Pfam bZIP transcription factor 27 83 IPR004827 GO:0003700|GO:0006355
Pral980g00001 151 Gene3D - 25 79 - -
Pral980g00001 151 CDD bZIP_plant_GBF1 28 79 IPR045314 GO:0003700|GO:0006355
Pral980g00001 151 Coils Coil 78 105 - -
Pral980g00001 151 PANTHER BZIP TRANSCRIPTION FACTOR 44 9 142 - -
Pral980g00001 151 MobiDBLite consensus disorder prediction 1 50 - -
Pral980g00001 151 SMART brlzneu 23 87 IPR004827 GO:0003700|GO:0006355
Pral980g00001 151 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 30 45 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral980g00001 Pral-Chr980 2964 3793 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral980g00001 20 112 bZIP Transcription Factor Family AT4G34590 59.140 7.36e-34 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral980g00001 bZIP_1 3.1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral980g00001 K25786 - csv:101203660 139.043