Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral977g00011 ATGGAGGAAGGTCACTGCACGAAATTCTTCGTCGTCGCCTCGAGTCCTGCAAATCCAGCTTTGGAGTCATCCAAGCATGGGAACAGGCAGTTGAACAGAAAGCCTAATACTCCCATATTGAAGCCTGACACCGTAGAAGATAATGATGAAGACGAAGAAGAGGGTCGAAGTGCATCTCGAAAGAGGCGCAAGAAAGTTGATGAAAGCGAAGAGAGATTGCAAAAAATGGAGGATTTACACCTTCAAAGGTTGCAAAGGGATCGGGGCATTCTATCAACCTCTTTTGCCTCAACTTCTAGTACATCAGTGTCATCAGACGGCGAAGATGGGACTGTGTCTACGTCAGAGGATGCAATTTATGGGGAGAAAGTGGAACCAGCCTTTGACTTAATGAAAACAATGTTGCGGGCTTCATACTCGGAAACAAAGAATGTGAAATCCACAGTAGAGGAGAAAAACATTGAACTGGAGGTGGCTAATAATAAGAAGGCAACTAAGGTTGATGCTATGAATGCGGTTGGAGGTAACATGAACGATGATTTGGAACCAAAAAGGCAATTGAGGGGTTCAGTTCCGAATGGCAATGGTGATGTTGAGGTCAAGGGGAAGGGTGGACCTAGATTCAAAGATTTGGGTGGGATGAAGAAGGTGCTGGAGGAATTGAAGATGGAAGTAATTGTTCCACTTTATCATCCACAGTTGCCAAGAAAGCTAGGGGTGAGGCCTATGGCAGGGATTTTGTTACATGGACCCCCAGGGTGTGGCAAAACCACTCTGGCTCTTGCTATAGCTAATGAGACCGGTTTTCCATTCTATCAGATATCAGCAACAGAAGTGGTTTCCGGAGTTTCAGGGGCTTCTGAAGAAAACATTAGAGAGCTTTTTTCTAAAGCATACAAGACTGCCCCATCAATTGTCTTTATCGATGAGATTGATGCAATTGCTTCAAAAAGAGAAAATTTACAACGTGAGATGGAGAGACGAATTGTAACACAGTTAATGACTTCAATGGATCAATCAAGCAGGCTCTTACAGCCAGCTGATAGCTCAGAAAGTTCTGATGCCCTTCCTGGCTATATTCTTGTTATTGGAGCTACGAATAGGCCTGATGCTGTTGACCCTGCCCTGAGAAGGCCTGGGCGATTTGATCGTGAAATTTTCCTTGGTGTCCCTGATGAATATGCTAGGGAGGAGATCTTGTCTGTGCTTACTCGCAATCTGAATCTGGAGGGCTCATTTGACCTTAGAAAAATAGCCAGGTCTACACCAGGTTTTGTTGGAGCAGATTTGGCAGCTCTAGCTGATAAGGCGGGTAACCTAGCAATGAAAAGAATTATTCACGACAGGAAACATGAATTATCCCAAGATCTTTTAGATGAGCATGATGAAGATTGGTGGAGGGAACCTTGGTTACCAGAAGAGATGGATAAGCTTGTCATCAAAATGTCAGATTTTGAGGAAGCAGTCAAATTAGTGCAACCTTCATCAAGAAGAGAAGGGTTCTCTTCCATTCCTAATGTAAAATGGGCAGATATTGGGGGGCTTGATCTTCTAAGACAAGAGTTTGAGCGTTATATTGTCAGACGCATAAAGTATCCAGAGGATTATGAGGAATTTGGGGTGGATCTTGAGACAGGATTTTTGCTTTATGGACCACCAGGGTGTGGTAAAACACTGATCGCTAAAGCTGTTGCCAATGAGGCGGGAGCCAATTTTATTCATATCAAGGGCCCTGAACTTCTAAATAAATATGTTGGAGAAAGTGAGCTAGCAGTGCGGACATTGTTTAGTCGGGCAAGAACATGTTCACCTTGCATTCTTTTCTTTGATGAGGTGGATGCACTGACAACTAAACGTGGTAAAGAAGGTGGATGGGTTGTAGAGCGACTATTGAACCAGCTACTTATTGAATTAGACGGTGCAGAGCAAAGGCAAGGTGTTTTTGTCATTGGTGCTACAAACAGACCTGAAGTGATGGACCGTGCAGTCCTTCGGCCCGGTAGGTTAGGTAAACTTCTGTTTGTTCCTCTGCCAAACTCAGATGAGCGAGGCTTGATCTTAAAAGCTCTTGCAAGGAAGAAGCCAATTGATGACACAGTGGATTTGTGTGCCATTGGAAGAATGGAAGCTTGTGAAAATCTTAGTGGTGCTGATCTTGCTGCATTGATGAACGAAGCAGCTCTGGCTGCTGCTGAAGAGAAGTCGGCATCAACAGCAGAGAGAACTTCAGATGCATTGACCATCAAATTAAGCCATTTTGAGACTGCTCTCACTAAAATTTCTCCCTCGGTGTCAGACATGCAAAAGCAATACTATCAACGATTAGCAGATACTTTTAAGGCTGCATGA 2349 0.4398 MEEGHCTKFFVVASSPANPALESSKHGNRQLNRKPNTPILKPDTVEDNDEDEEEGRSASRKRRKKVDESEERLQKMEDLHLQRLQRDRGILSTSFASTSSTSVSSDGEDGTVSTSEDAIYGEKVEPAFDLMKTMLRASYSETKNVKSTVEEKNIELEVANNKKATKVDAMNAVGGNMNDDLEPKRQLRGSVPNGNGDVEVKGKGGPRFKDLGGMKKVLEELKMEVIVPLYHPQLPRKLGVRPMAGILLHGPPGCGKTTLALAIANETGFPFYQISATEVVSGVSGASEENIRELFSKAYKTAPSIVFIDEIDAIASKRENLQREMERRIVTQLMTSMDQSSRLLQPADSSESSDALPGYILVIGATNRPDAVDPALRRPGRFDREIFLGVPDEYAREEILSVLTRNLNLEGSFDLRKIARSTPGFVGADLAALADKAGNLAMKRIIHDRKHELSQDLLDEHDEDWWREPWLPEEMDKLVIKMSDFEEAVKLVQPSSRREGFSSIPNVKWADIGGLDLLRQEFERYIVRRIKYPEDYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGAEQRQGVFVIGATNRPEVMDRAVLRPGRLGKLLFVPLPNSDERGLILKALARKKPIDDTVDLCAIGRMEACENLSGADLAALMNEAALAAAEEKSASTAERTSDALTIKLSHFETALTKISPSVSDMQKQYYQRLADTFKAA 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral977g00011 782 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 505 779 IPR027417 -
Pral977g00011 782 MobiDBLite consensus disorder prediction 87 112 - -
Pral977g00011 782 Pfam ATPase family associated with various cellular activities (AAA) 548 676 IPR003959 GO:0005524|GO:0016887
Pral977g00011 782 Pfam ATPase family associated with various cellular activities (AAA) 246 389 IPR003959 GO:0005524|GO:0016887
Pral977g00011 782 FunFam ATPase, AAA family protein 505 683 - -
Pral977g00011 782 Pfam AAA+ lid domain 413 447 IPR041569 -
Pral977g00011 782 Pfam AAA+ lid domain 700 736 IPR041569 -
Pral977g00011 782 ProSitePatterns AAA-protein family signature. 360 378 IPR003960 GO:0005524|GO:0016887
Pral977g00011 782 PANTHER AAA-FAMILY ATPASE 61 780 - -
Pral977g00011 782 MobiDBLite consensus disorder prediction 54 85 - -
Pral977g00011 782 FunFam Cell division control protein 48 homolog C 391 499 - -
Pral977g00011 782 CDD RecA-like_NVL_r2-like 515 675 - -
Pral977g00011 782 MobiDBLite consensus disorder prediction 12 118 - -
Pral977g00011 782 MobiDBLite consensus disorder prediction 17 37 - -
Pral977g00011 782 Gene3D - 678 758 - -
Pral977g00011 782 FunFam Ribosome biogenesis ATPase RIX7 197 389 - -
Pral977g00011 782 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 207 498 IPR027417 -
Pral977g00011 782 Gene3D - 200 389 IPR027417 -
Pral977g00011 782 Coils Coil 59 79 - -
Pral977g00011 782 SMART AAA_5 242 392 IPR003593 GO:0016887
Pral977g00011 782 SMART AAA_5 543 679 IPR003593 GO:0016887
Pral977g00011 782 Gene3D - 391 499 - -
Pral977g00011 782 MobiDBLite consensus disorder prediction 173 205 - -
Pral977g00011 782 ProSitePatterns AAA-protein family signature. 647 665 IPR003960 GO:0005524|GO:0016887
Pral977g00011 782 Gene3D - 505 772 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral977g00011 Pral-Chr977 30422 37185 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral977g00011 478 778 Calmodulin-binding Proteins AT3G56690 41.503 1.88e-65 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral977g00011 K14571 - tcc:18593187 1050.43