Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral970g00135 ATGTCAACATTGAACCATCTTTTTGGGGTTCCAGAGCAAATATGTTACATTCAATGTGGATTCTGTGCCACCATTTTAATGGTGAGCGTCCCATGCAGCAGTTTGTCTATGGTGGTGACAGTCAGATGTGGACATTGCACAAGCCTCCTCTCTGTTAATATGATGAAAGCCTCTTTTGTCCCCTTGCACCTTTTAGCCTCCTTTACTCATCTTCAGCCAAAAGAGGGGAGTCCAGAAGAAGAAGCAAACAAGACTTTGGACAGCCATAACCATAATGGAGGATCCATGATGACCTGTTCTGATTGTGAAGAAGAGGACGCAATTCCCATGAGCATTGTGGCACATAAACCCCCAGAGAAGAGACAGAGAACACCTTCAGCTTATAACCGCTTCATCAAAGAAGAGATCAGAAGGCTAAAGGCTGAAAACCCAGATATGGCTCACAAAGAAGCTTTTAGCACAGCTGCAAAAAATTGGGCTTGCAAAGGAGATGAAGAAAGTTGCAGCCAGACAGAGCACCTTGTCGATCTTGACTCCCATTTGGACCCTCATGAAGATGCTGAGGCTAAAGAAGAAGAAGAAGAAGGCCAAGGTTTCCGTGAAAGAAAGGTTCCAAGGAATTCCATCTGGGCAAGGACACCCTTTGAGTGA 651 0.4501 MSTLNHLFGVPEQICYIQCGFCATILMVSVPCSSLSMVVTVRCGHCTSLLSVNMMKASFVPLHLLASFTHLQPKEGSPEEEANKTLDSHNHNGGSMMTCSDCEEEDAIPMSIVAHKPPEKRQRTPSAYNRFIKEEIRRLKAENPDMAHKEAFSTAAKNWACKGDEESCSQTEHLVDLDSHLDPHEDAEAKEEEEEGQGFRERKVPRNSIWARTPFE 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral970g00135 216 Gene3D High mobility group box domain 113 204 IPR036910 -
Pral970g00135 216 MobiDBLite consensus disorder prediction 73 94 - -
Pral970g00135 216 MobiDBLite consensus disorder prediction 179 207 - -
Pral970g00135 216 PANTHER PROTEIN YABBY 6-RELATED 2 161 IPR006780 GO:0007275
Pral970g00135 216 SUPERFAMILY HMG-box 114 166 IPR036910 -
Pral970g00135 216 CDD HMG-box_SF 123 166 - -
Pral970g00135 216 Pfam YABBY protein 11 160 IPR006780 GO:0007275
Pral970g00135 216 MobiDBLite consensus disorder prediction 179 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral970g00135 Pral-Chr970 1137122 1138826 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral970g00135 2 216 C2C2-YABBY Transcription Factor Family AT1G23420 53.448 5.09e-70 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Pral970g00135 YABBY 2.3e-60 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral970g00135 K25796 - gmx:100806755 325.865