Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral970g00121 ATGAGAAAATTGTGTGAGGCCTGTGCCCAGAAGTGCCTTCCGATTCAGAGAAAGAGAAAAAAATCGTCAAATGTACCTTCTTCCTTCTTCAAGTATCTGCCTCCTAAATTTGGTCGCACAGCGTCAACCCTGGTTGACGAAGAAGCCATTGTTGAGGATTCGAGTGGACAACGATGGACGGTACAAATATCAGTTGTGGATAATTCTTATGCTTTTCACGAGGGATGGAATGCTTTTTCGTTGGATCATGGGCTTGAAGTTGGACACTTTTTGGTGTTCCATTACATGGGAAGATCACACTTTGTTGTTGAGATTTTTGATAAATCTGGGTGTGAAAAGGTTGATTTTCCCGGGCGGAGGAAGCAGAAGAAGAGAAAAAAGATCAGAATTGACCTTGATGCTAGCGAGGAATTGTTAAACAGACAAGGTTTATTATCCTCGGAGTCAGATGCGGAAAAAGTGCAAAGCCAGGACGAGGTTGTTGGAGCAAACAGTGCAGAAATTAACGAAGAGAAAACCTCAGAAAAGAGGATCCAATCTTTGTACCAAGACAAAACCTTTGAAGATCCTTGTTACTTGAAAGACCAAGACATTGAAGACAAAGAAAGAGAGAACAGGAGTCCTATGTTTGATGTCAGGTATGAAATATTGAACAATTCAGGTGCTCACAGGACCGGCAAAATTACAGGCAGCAATGAAATAGTTGTTACAAACATCTATACCCAAGATCCTTTGCTTGAAGAGATGATGGTTAATAATGGAGCAAATCAAGATCCGTTTGAAGTTGAAGTAACAAAAAGAAGTCATTTTCTTGAAGAGTTAGACAGGAGTACATTACATCCTTGTGGAGCCAAGATTCCTGAGCATCTTTTGATCCCATGTACCGTGCAACATGAAGAAACCAGAGTAAACAATCTCATCATGCCCAACTGGGAAGACCAAAAGTGCCAATTTGCTGAGAACTCAGAGACCAAGCAATTATTGATATCGAAAGATGAATATCCTTTGCACGCTGGCAATTGTGAGGATACCAAAGAGATGATCGCTGGGTTGCATGTGTCCCTGGATGCTGCTCCTATGTGCAATGTTACAGTGGAAATGGAGAGAATGTTTCAAAAAGAGCTCCTGGACATGACTTCAGATATGTGCAGTCACAATGATAAAATCCGGTCAATTATTGGAGATCAAGGCAGCAATTTCAGTTCAGTGAAAGCTGAACCTTCTGACTATGGTTGTCACTCAAAACTCCAGCCATCTTGGTTTAACTGTATCAACTGTACAGTAATTTTAAACTGCATGACGAAATTAAGAGTATGTGTGTATGCATATCATGAGCTTAGGGAAGAAATGTGA 1353 0.408 MRKLCEACAQKCLPIQRKRKKSSNVPSSFFKYLPPKFGRTASTLVDEEAIVEDSSGQRWTVQISVVDNSYAFHEGWNAFSLDHGLEVGHFLVFHYMGRSHFVVEIFDKSGCEKVDFPGRRKQKKRKKIRIDLDASEELLNRQGLLSSESDAEKVQSQDEVVGANSAEINEEKTSEKRIQSLYQDKTFEDPCYLKDQDIEDKERENRSPMFDVRYEILNNSGAHRTGKITGSNEIVVTNIYTQDPLLEEMMVNNGANQDPFEVEVTKRSHFLEELDRSTLHPCGAKIPEHLLIPCTVQHEETRVNNLIMPNWEDQKCQFAENSETKQLLISKDEYPLHAGNCEDTKEMIAGLHVSLDAAPMCNVTVEMERMFQKELLDMTSDMCSHNDKIRSIIGDQGSNFSSVKAEPSDYGCHSKLQPSWFNCINCTVILNCMTKLRVCVYAYHELREEM 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral970g00121 450 PANTHER B3 DOMAIN-CONTAINING 23 193 - -
Pral970g00121 450 SMART B3_2 9 109 IPR003340 GO:0003677
Pral970g00121 450 Gene3D - 12 111 IPR015300 -
Pral970g00121 450 Pfam B3 DNA binding domain 18 108 IPR003340 GO:0003677
Pral970g00121 450 CDD B3_DNA 21 107 IPR003340 GO:0003677
Pral970g00121 450 ProSiteProfiles B3 DNA-binding domain profile. 16 109 IPR003340 GO:0003677
Pral970g00121 450 SUPERFAMILY DNA-binding pseudobarrel domain 20 111 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral970g00121 Pral-Chr970 1028639 1031325 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral970g00121 33 189 B3 DNA Binding Superfamily AT4G01580 26.752 7.28e-13 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pral970g00121 B3 1.3e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral970g00121 - - pcin:129308262 511.916