Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral970g00102 ATGGCCTCTTCTTCTCGCTCTATCAACCACAACCAATTCCTCAAATACATCGATGAAGAAAGAGGACCAAAAGGTGCAATACAAGAGATTGATGAAGAAGAAGAAGAAGAAGCAGAAGAAGACGATGATGATAACGAAGAAGACGAAGAAGACGACGACTTGCTGCAGCTGAAATTGGGGTCAGGATCTGCTACAACCTTATGCAGGAAAAGAGTGGGTAATAATAATGGTGAATCAAACCCGGTAGTTCCAAGATCTGGCTCACTAGGGTTAGGGTTAGGGTTAAAATTATGGCCCAACATGGAGCAGGAAAGTTCAGAAATGGCAGGTGTGGAGGAAGTAGCAAGAAGATTTATTGGGAGGTTACCATCATGGCAAATGGATCCTCAGGATTGGTATAAACCCAGTCCACCAGCTCATAATTCTCATCATTTCTCCCACACAAATCCCCACCACTCTGGTTTGTGGTTTACGCTACACTCTTCTACCAACCAAAGAGGAGAAGCTTTACCTCAGGTGCCAAAGGCGTACATTAGAGTGAAGAACGAAAACATGACGATCTTCATGGTTAAGAAGTATCTGGTTACAAAACTTGGTCTCTTCAACGAAAATGAGGTTGAGATTTTATGCATGGGACAGAGATTGTTGAATGTTCAAAGCTTGAAGGTGGTGAGGGACGCCATTTGGATTCCTGCACTTGTTGACTCTTTAAACGCAGCATCATCTATATCATCATCACTAGCAGATTCATCATGTGGCATGTCTGCCCCAAATTTAATGCCATTACTTTATCAAAAATATATTATTTCAAATAACTCAAATCATTTGTAG 831 0.4152 MASSSRSINHNQFLKYIDEERGPKGAIQEIDEEEEEEAEEDDDDNEEDEEDDDLLQLKLGSGSATTLCRKRVGNNNGESNPVVPRSGSLGLGLGLKLWPNMEQESSEMAGVEEVARRFIGRLPSWQMDPQDWYKPSPPAHNSHHFSHTNPHHSGLWFTLHSSTNQRGEALPQVPKAYIRVKNENMTIFMVKKYLVTKLGLFNENEVEILCMGQRLLNVQSLKVVRDAIWIPALVDSLNAASSISSSLADSSCGMSAPNLMPLLYQKYIISNNSNHL 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral970g00102 276 PANTHER RING FINGER PROTEIN 126 265 IPR044171 GO:0007275
Pral970g00102 276 Gene3D - 137 231 - -
Pral970g00102 276 MobiDBLite consensus disorder prediction 1 60 - -
Pral970g00102 276 Coils Coil 31 51 - -
Pral970g00102 276 MobiDBLite consensus disorder prediction 29 54 - -
Pral970g00102 276 MobiDBLite consensus disorder prediction 13 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral970g00102 Pral-Chr970 871334 875969 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral970g00102 170 208 C3H Transcription Factor Family AT3G23060 53.846 3.76e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral970g00102 - - cave:132185804 165.622