Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral970g00101 ATGGCCTCTTCTTCTCGCTCTATCAACCACAACCAATTCCTCAAATACATCGATGAAGAAAGAGGACCAAAAGGTGCAATACAAGAGATTGATGAAGAAGAAGAAGAAGAAGCAGAAGAAGACGATGATGATAACGAAGAAGACGAAGAAGACGACGACTTGCTGCAGCTGAAATTGGGGTCAGGATCTGCTACAACCTTATGCAGGAAAAGAGTGGGTAATAATAATGGTGAATCAAACCCGGTAGTTCCAAGATCTGGCTCACTAGGGTTAGGGTTAGGGTTAAAATTATGGCCCAACATGGAGCAGGAAAGTTCAGAAATGGCAGGTGTGGAGGAAGTAGCAAGAAGATTTATTGGGAGGTTACCATCATGGCAAATGGATCCTCAGGATTGGTATAAACCCAGTCCACCAGCTCATAATTCTCATCATTTCTCCCACACAAATCCCCACCACTCTGGTTTGTGGTTTACGCTACACTCTTCTACCAACCAAGGAGAAGCTTTACCTCAGGTGCCAAAGGCGTACATTAGAGTGAAGAACGAAAACATGACGATCTTCATGGTTAAGAAGTATCTGGTTACAAAACTTGGTCTCTTCAACGAAAATGAGGTTGAGATTTTATGCATGGGACAGAGATTGTTGAATGTTCAAAGCTTGAAGGTGGTGAGGGACGCCATTTGGATTCCTGCACTTGTTGACTCTTTAAACGCAGCATCATCTATATCATCATCACTAGCAGATTCATCATGTGGCATGTCTGCCCCAAATTTAATGCCATTACTTTATCAAAAATATATTATTTCAAATAACTCAAATCATTTGTAG 828 0.4155 MASSSRSINHNQFLKYIDEERGPKGAIQEIDEEEEEEAEEDDDDNEEDEEDDDLLQLKLGSGSATTLCRKRVGNNNGESNPVVPRSGSLGLGLGLKLWPNMEQESSEMAGVEEVARRFIGRLPSWQMDPQDWYKPSPPAHNSHHFSHTNPHHSGLWFTLHSSTNQGEALPQVPKAYIRVKNENMTIFMVKKYLVTKLGLFNENEVEILCMGQRLLNVQSLKVVRDAIWIPALVDSLNAASSISSSLADSSCGMSAPNLMPLLYQKYIISNNSNHL 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral970g00101 275 PANTHER RING FINGER PROTEIN 126 264 IPR044171 GO:0007275
Pral970g00101 275 MobiDBLite consensus disorder prediction 1 60 - -
Pral970g00101 275 Coils Coil 31 51 - -
Pral970g00101 275 Gene3D - 136 230 - -
Pral970g00101 275 MobiDBLite consensus disorder prediction 29 54 - -
Pral970g00101 275 MobiDBLite consensus disorder prediction 13 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral970g00101 Pral-Chr970 871334 875969 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral970g00101 169 207 C3H Transcription Factor Family AT3G23060 53.846 3.90e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral970g00101 - - cave:132185804 161.77