Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral970g00098 ATGGGCAGATCTCCCTGCTGCGAAAAACAACACACTAACAAAGGCGCTTGGACCAAAGAAGAAGACCAACGCCTCATCAACTACATCACCCTCCACGGCCAAGGCTCCTGGCGATCCCTTCCCAAAGCTGCCGGTTTGCTGAGATGTGGGAAAAGTTGCAGACTCAGATGGATTAATTATCTGAGACCTGATCTCAAGAGAGGCAATTTTACCCAAGAGGAGGATGACCTTATCATTAATCTTCACAGCTTACTCGGCAACAAGTGGTCTCTCATAGCAGCTAGGTTACCGGGTCGAACCGATAACGAGATCAAGAACTACTGGAACACCCACATCAAGCGCAAGCTCTACAGCCTGGGAATAGACCCTCAAACTCACCGTCCACTTACCGCCACAGCACCGAGAGCTACCACCCCGGCGATCAGCGGTAACAAGAGAAGTAGCTGCAGCAGCCAAAACAACCCTAAAGTTAAGCTAGTCTCATCAGGAGAAGATTCAACTAGCAATAGCAGCAGTGGGATTACCACAGACGAATCAGCAAGTTCTGATAATCATCATCATCATCATCATGATCATGAACTCAACTTGGAGCTCTCCATAGCTCTTCCTTCTTCCTCTAACAACAACAAAACCCTCGTCGTTCGCCCCTCCTCCGTCTCGGACAGCTTAAAACGACAACGACGTGATGAAGTGTGTCTGTGTTACATAGGGTTTCAGAGCATTGGTGGTAATAATCAAGCGTGTAGGTGCAAAGCCTTGATGATGGATGCTTGTTCAGTAATTACTACTGCACCTACTTCTTCTACCGATGCTGCTACTTCATCAGACAATAACGTTTACAGATTTTTCACTCCCTTGAATTCTTAG 867 0.4717 MGRSPCCEKQHTNKGAWTKEEDQRLINYITLHGQGSWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTQEEDDLIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSLGIDPQTHRPLTATAPRATTPAISGNKRSSCSSQNNPKVKLVSSGEDSTSNSSSGITTDESASSDNHHHHHHDHELNLELSIALPSSSNNNKTLVVRPSSVSDSLKRQRRDEVCLCYIGFQSIGGNNQACRCKALMMDACSVITTAPTSSTDAATSSDNNVYRFFTPLNS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral970g00098 288 CDD SANT 69 112 IPR001005 -
Pral970g00098 288 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Pral970g00098 288 Gene3D - 69 116 - -
Pral970g00098 288 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pral970g00098 288 CDD SANT 16 61 IPR001005 -
Pral970g00098 288 Gene3D - 14 66 - -
Pral970g00098 288 MobiDBLite consensus disorder prediction 124 193 - -
Pral970g00098 288 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Pral970g00098 288 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pral970g00098 288 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pral970g00098 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pral970g00098 288 MobiDBLite consensus disorder prediction 130 179 - -
Pral970g00098 288 FunFam MYB-related transcription factor 13 66 - -
Pral970g00098 288 SMART sant 13 63 IPR001005 -
Pral970g00098 288 SMART sant 66 114 IPR001005 -
Pral970g00098 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pral970g00098 288 FunFam Myb transcription factor 68 137 - -
Pral970g00098 288 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral970g00098 Pral-Chr970 841001 842525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral970g00098 1 206 MYB Transcription Factor Family AT4G09460 61.244 1.58e-86 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral970g00098 Myb_DNA-binding 2.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral970g00098 K09422 - gmx:778033 310.071