Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral970g00083 ATGCCTCTTCTTAAAAGGAAGCCTTTTGTCTTGGCTGAGCCACCTAAGGATTTGGAGCCACATGAGCTTGTCCATCAAGTTCGATTCACAAAAGAAATTTTCCGAGATTATCATGATTATTTGAACCGTATAAATTTGTATCGCCAGAGAGTTTGGACATGTAAAGTCACTGGGAAATCTAACTTGACTTTTGAAGAGGCTATGGTGTCAGAAAAGCGTGCCACTGAAAAAGTCCAACAAATTCCCAAAGAATTAATGGAACCTGCACTAAGGATTATTCAATACAGCACGCTTCCTTTGAGGGAACTCGCTGACGCAATAGCTGAAAAATTGCAAGAACAGGTGTATGTGGGTGCTGAGCTGCATGGAAAAAAGGATGATGGAGAGCATCCCTGCAAAATATTAAAAGTCGTTAGGGAAGGAGTTGATGAATTCCGCTATGAGGTAGCTTGGCTTGACAAAAACAAGAGAACAATTGAAAAAGCAGAAGTCAGTGCCAAGGATTTGGTGCAGAAGAAGTTTCCTTTTAGCAGGAACATCTTGAAATCTTTTATCCGGGAATCTACATATCGTAATGCTCCTTGGGTGATACATGATGAATTGGCACGAAGTTATGGAATCTCAACTGATATCCCAGAGGAATTAAAAGGAAGAGCTTTCTTCAACAACGGACTTTTAATTTGCAACAAGAAAAGGAAAAATGAGGATGTAAATGGAGATGCTGAAAATTGTAAAAGAAGGAAGTCGGGTGATGCAAAAAATGATGGCTTCCCTTCCGTGAAAGAAAATGGCCAATGCAAGGTGGAACCTATCAAATATCCGATTGATGATTTATTGGTGAAACCTAGTCCAAGAGATCCTCATCGTCCTTCTCCATCGAGAGATTTCAATGTTCCGATTCATCATGTAGGGGATCTCTTAATGGTTTGGGATTTTTGTACTTCTTTTGGTAGGTTGTTGCATTTGTCGCCCTACTCTCTGGAAGATTTTGAAAATTCAATCTGCCACAAGGAAAGCAATGTGGTTCTCCTAATGGAATCTCATGCAGCACTCTTTCGGGTGCTCATGAAAGACGATGGTGATTATGCTTCAGTTGTGCAGAAAAGAAAACGGAAGTTTAAGATTACAATGATTAATTGGCAAGAATATTTATGCGATTTTCTAGAAATGATCAATGTTCCTGGGTTACGGCAGTTTGAAGCTACCATAAAAAGGGGACATTATGGCCTCGTTGATATCAATGCTAAGCTAGAAATCTTGTGCGAATTGGTCAATCGAGTTCTTGAAACCTCCATTTTTAGGGAAAAGTTGGACGAGGTTATTGAACAGCGGCAGGCAATTGGTGCTACTAGAAGAGGAGAAGCGCTAAAAGATGGTAGAAAAAGAAGAGAAGAAAAGGAACGGCTGAAAGCTGAGTTTGAAAGCAATGGGAGTATGGATGGGCACCATCAAATAAATGTAGCAACTGTCTCAACAAAAAATAATCACAGTAGACAGAATGGGGACATGGGAAAGAAAAGAAATGGAGAGAAGGAATCATCTAGGAACGGGGATGCTTTGGGTGGAAGTTTGGACAAACATTCAAATGGTGCGTCCAAGAAGTCTTCTAGGAAGCTGAGTTTAGAACTGAAAGAACCAGCAGGAAATGGAAATGAGTCATCCATAAAGGAATCACAGAAGCAATTAAATGGGGAGAACGATCCGCCAGAGAAGAACAGTATAGAAAAGAGGAGAGAATATTTTGAACGAGAGATGGAAAAACGATTTGTTCGTACAAGTCCCCTGGGTAAAGACAGGCATTACAACAGGTATTGGTGGTTTCGCCGTGATGGGAGGATATTTGTGGAAAGTTCTGATTCCAAGGAATGGGGCTACTACAGCAGCAAGGAAGAGCTTGAGGCATTGATGAGGTCACTGAATCGCAAGGGTGTGCGGGAAAGAGCATTGCACAAGCAACTGGAAAAATATTATAGTAGAATATGTACGGAACTTCAGAAGAGGTTAAAGGATCAGATACAGAAAATTGCACTAGATGAGTCTGTGCTCCGAAGGTCTACTCGTGTTCGAGCGCCACCTAGAGAAAATCCTGCCAATGCTTTCCTCAAATATGTTAATAAGTGGAAGGAAGAGTAG 2133 0.4098 MPLLKRKPFVLAEPPKDLEPHELVHQVRFTKEIFRDYHDYLNRINLYRQRVWTCKVTGKSNLTFEEAMVSEKRATEKVQQIPKELMEPALRIIQYSTLPLRELADAIAEKLQEQVYVGAELHGKKDDGEHPCKILKVVREGVDEFRYEVAWLDKNKRTIEKAEVSAKDLVQKKFPFSRNILKSFIRESTYRNAPWVIHDELARSYGISTDIPEELKGRAFFNNGLLICNKKRKNEDVNGDAENCKRRKSGDAKNDGFPSVKENGQCKVEPIKYPIDDLLVKPSPRDPHRPSPSRDFNVPIHHVGDLLMVWDFCTSFGRLLHLSPYSLEDFENSICHKESNVVLLMESHAALFRVLMKDDGDYASVVQKRKRKFKITMINWQEYLCDFLEMINVPGLRQFEATIKRGHYGLVDINAKLEILCELVNRVLETSIFREKLDEVIEQRQAIGATRRGEALKDGRKRREEKERLKAEFESNGSMDGHHQINVATVSTKNNHSRQNGDMGKKRNGEKESSRNGDALGGSLDKHSNGASKKSSRKLSLELKEPAGNGNESSIKESQKQLNGENDPPEKNSIEKRREYFEREMEKRFVRTSPLGKDRHYNRYWWFRRDGRIFVESSDSKEWGYYSSKEELEALMRSLNRKGVRERALHKQLEKYYSRICTELQKRLKDQIQKIALDESVLRRSTRVRAPPRENPANAFLKYVNKWKEE 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral970g00083 710 MobiDBLite consensus disorder prediction 237 255 - -
Pral970g00083 710 ProSiteProfiles WAC domain profile. 22 129 IPR013136 -
Pral970g00083 710 MobiDBLite consensus disorder prediction 451 477 - -
Pral970g00083 710 MobiDBLite consensus disorder prediction 479 498 - -
Pral970g00083 710 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 24 120 IPR013136 -
Pral970g00083 710 Coils Coil 152 172 - -
Pral970g00083 710 SMART testlast3 300 361 IPR018501 -
Pral970g00083 710 MobiDBLite consensus disorder prediction 551 568 - -
Pral970g00083 710 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 590 656 IPR028941 -
Pral970g00083 710 MobiDBLite consensus disorder prediction 237 259 - -
Pral970g00083 710 Coils Coil 456 476 - -
Pral970g00083 710 MobiDBLite consensus disorder prediction 499 514 - -
Pral970g00083 710 ProSiteProfiles DDT domain profile. 300 361 IPR018501 -
Pral970g00083 710 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 1 708 - -
Pral970g00083 710 MobiDBLite consensus disorder prediction 451 574 - -
Pral970g00083 710 Pfam DDT domain 301 358 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral970g00083 Pral-Chr970 763493 770399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral970g00083 398 655 Homeobox Transcription Factor Family AT5G44180 28.090 7.99e-09 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Pral970g00083 WAC_Acf1_DNA_bd 4.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral970g00083 - - qsa:O6P43_023448 973.385