Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral970g00080 ATGGCCGCAGAAGTTTGTTGTGGCTCCCTGCTCTTATCCGGTGAAGCTCAGTTGCACCACCATCAACAACGGCAAGCAAGACGAGCCAGAACTCTAAGAACCACTAGCAGATTACAGTTCTCATCTTCACTCTCTCTCGTTCCCCTCGAAGCTTCCTTCTCTTCTTCTCTCTCCAAACATGCTTCCTTCTCCGCCACTTTTCGCGTCAATAGGTTCAGAGTGTGCTGCCAGGTTGCTGGTGGCGCCTACGACCTCGAATTTGCCGCCAAAGTTGGCCAGGACCGTCTGTCTAAGGTTCCTATCTCTAATATAAGGAATTTCAGCATCATTGCTCATATTGACCATGGGAAATCAACATTAGCTGATAAATTGCTTCAAGTGACTGGTACTGTCCAACAGCGAGAAATGAAGGATCAGTTTCTTGATAACATGGATTTAGAGAGAGAAAGAGGCATCACAATTAAGCTGCAGGCAGCTCGAATGCGGTACGTGTTTGAAAATGAACCATATTGCTTAAATCTAATTGATACTCCAGGGCATGTTGACTTCTCTTACGAGGTTTCCCGATCACTTGCTGCGTGTGAGGGTGCTCTTCTTGTTGTAGATGCTTCACAGGGAGTTGAAGCGCAAACACTAGCTAATGTTTATTTAGCCTTGGAGAACGACCTTGAAGTTATACCAGTTTTGAATAAAATTGATCTTCCAGGTGCTGAACCAGATCGAGTTATGAAAGAGATAGAAGAGATTGTGGGGTTAGATTGTAGCAATGCAATACTCTGCTCTGCGAAGGAAGGAATAGGTATAACTGATATTCTCAATGCAATTGTTACAAGGATTCCACCTCCTGCTGAAACAGCTGAAAGGCCATTGAGGGCTTTAATTTTTGATAGTTACTATGATCCGTATAGGGGTGTTATTGTATATTTTCGAGTTGTAGATGGGACTATAAAGAAAGGTGACAGAGTTTATTTTATGGCTAGTCAGAAGGATTACTTTGCTGATGAAATAGGAGTTTTGTCTCCCCGTCAACTTCAAGTTGAAGAATTGTATGCGGGTGAGGTGGGCTATCTTTCGGCATCTATAAGAACTGTAGCTGATGCTAGAGTGGGTGACACTATTACCCACTATGGTAGACGGGCAGAGAACTCTCTCCCTGGATATGAAGAAGCCACTCCCATGGTTTTTTGTGGCCTATTTCCTGTTGATGCAGACCAGTTTCCTGAGCTACGTGATGCACTTGAGAAGCTACAGCTCAATGATGCTGCACTGAAGTTTGAACCTGAGACTTCAAGTGCCATGGGATTTGGCTTTAGATGTGGGTTTCTTGGACTTCTCCATATGGAAATTGTTCAGGAAAGACTTGAGAGAGAATACAATTTGAGCCTGATAACAACTGCTCCAAGTGTTGTATACAGGGTGAACTGTGTAAATGGTGATACTGTTGAGTGCTCAAATCCTTCTTTACTCCCTGAACCTGGAAAAAGGAAGTCAATTGAAGAGCCATTTGTTAAGATTGAAATGCTTACACCAAAGGATTACATTGGTCCACTTATGGAATTGGCTCAAGACAGAAGAGGGCAATTTAAAGAAATGAAATTTATCACTGAAAACAGAGCATCAATCACCTATGAATTACCACTAGCGGAGATGGTTGGTGATTTCTTTGACCAGTTAAAGTCCAGAAGTAAGGGTTATGCTAGCATGGAGTATGTTTTTATTGGGTACACAGAAAGTGATTTAATTAGACTTGACATACAGATAAATGGTGATCCAGTGGAACCATTGTCTACAATTGTTCACAAAGATAAGGCATATTCAGTAGGGCGGGCTTTGACTCAAAAGTTGAAAGAGCTCATACCACGTCAAATGTTTAAAGTTCCAATTCAAGCTTGTATAGGTTCAAAAGTGATTGCTAGTGAGGCTTTATCTGCAATAAGGAAGGACGTGTTAGCTAAATGCTACGGTGGGGACATTTCAAGAAAAAAGAAATTACTTAAGAAACAGGCTGAAGGAAAGAAAAGAATGAAAGCGATTGGTAAAGTTGATGTGCCGCAAGAAGCCTTCATGGCAGTTTTGAAACTTGAAAAGGAGGTGATATGA 2100 0.419 MAAEVCCGSLLLSGEAQLHHHQQRQARRARTLRTTSRLQFSSSLSLVPLEASFSSSLSKHASFSATFRVNRFRVCCQVAGGAYDLEFAAKVGQDRLSKVPISNIRNFSIIAHIDHGKSTLADKLLQVTGTVQQREMKDQFLDNMDLERERGITIKLQAARMRYVFENEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENDLEVIPVLNKIDLPGAEPDRVMKEIEEIVGLDCSNAILCSAKEGIGITDILNAIVTRIPPPAETAERPLRALIFDSYYDPYRGVIVYFRVVDGTIKKGDRVYFMASQKDYFADEIGVLSPRQLQVEELYAGEVGYLSASIRTVADARVGDTITHYGRRAENSLPGYEEATPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRKSIEEPFVKIEMLTPKDYIGPLMELAQDRRGQFKEMKFITENRASITYELPLAEMVGDFFDQLKSRSKGYASMEYVFIGYTESDLIRLDIQINGDPVEPLSTIVHKDKAYSVGRALTQKLKELIPRQMFKVPIQACIGSKVIASEALSAIRKDVLAKCYGGDISRKKKLLKKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVI 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral970g00080 699 Pfam Elongation factor Tu domain 2 304 374 IPR004161 GO:0005525
Pral970g00080 699 FunFam Translation factor GUF1, mitochondrial 285 383 - -
Pral970g00080 699 Hamap Elongation factor 4 [lepA]. 99 697 IPR006297 GO:0005525
Pral970g00080 699 Hamap Translation factor GUF1 homolog, organellar chromatophore [lepA]. 96 696 IPR027518 -
Pral970g00080 699 Gene3D Elongation Factor G (Translational Gtpase), domain 3 385 466 - -
Pral970g00080 699 Gene3D - 579 653 IPR038363 -
Pral970g00080 699 FunFam Translation factor GUF1, mitochondrial 467 577 - -
Pral970g00080 699 CDD EF4_III 392 467 - -
Pral970g00080 699 PRINTS GTP-binding elongation factor signature 149 157 IPR000795 GO:0003924|GO:0005525
Pral970g00080 699 PRINTS GTP-binding elongation factor signature 225 234 IPR000795 GO:0003924|GO:0005525
Pral970g00080 699 PRINTS GTP-binding elongation factor signature 189 200 IPR000795 GO:0003924|GO:0005525
Pral970g00080 699 PRINTS GTP-binding elongation factor signature 173 183 IPR000795 GO:0003924|GO:0005525
Pral970g00080 699 PRINTS GTP-binding elongation factor signature 106 119 IPR000795 GO:0003924|GO:0005525
Pral970g00080 699 FunFam Elongation factor 4 101 284 - -
Pral970g00080 699 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 308 IPR027417 -
Pral970g00080 699 Pfam Elongation factor G C-terminus 498 579 IPR000640 -
Pral970g00080 699 SUPERFAMILY EF-G C-terminal domain-like 498 592 IPR035647 -
Pral970g00080 699 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 102 283 IPR000795 GO:0003924|GO:0005525
Pral970g00080 699 Pfam Elongation factor Tu GTP binding domain 103 280 IPR000795 GO:0003924|GO:0005525
Pral970g00080 699 SUPERFAMILY EF-G C-terminal domain-like 391 469 IPR035647 -
Pral970g00080 699 FunFam Translation factor GUF1, mitochondrial 579 653 - -
Pral970g00080 699 CDD EF4_II 290 375 - -
Pral970g00080 699 CDD LepA 105 282 - -
Pral970g00080 699 SMART EFG_C_a 497 585 IPR000640 -
Pral970g00080 699 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 142 157 IPR031157 -
Pral970g00080 699 Pfam GTP-binding protein LepA C-terminus 587 693 IPR013842 -
Pral970g00080 699 Gene3D - 467 578 - -
Pral970g00080 699 Gene3D - 101 284 IPR027417 -
Pral970g00080 699 CDD lepA_C 500 579 IPR035654 -
Pral970g00080 699 NCBIfam small GTP-binding protein domain 105 274 IPR005225 GO:0005525
Pral970g00080 699 FunFam Translation factor GUF1, mitochondrial 385 466 - -
Pral970g00080 699 SUPERFAMILY Translation proteins 281 387 IPR009000 -
Pral970g00080 699 NCBIfam translation elongation factor 4 103 694 IPR006297 GO:0005525
Pral970g00080 699 Gene3D Translation factors 285 384 - -
Pral970g00080 699 PANTHER TRANSLATION FACTOR GUF1-RELATED 86 694 IPR006297 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral970g00080 Pral-Chr970 734557 742791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral970g00080 104 337 Eukaryotic Initiation Factors Gene Family AT3G22980 31.984 1.89e-24 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral970g00080 K21594 - qsa:O6P43_023443 1158.67