LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral970g00069	ATGGCTTCCCCTCCGGTGAATTCTTTACCCACAGCGTATCAGGCAGGGACGAGCCTCGCCGTACCGGACTGGCTGAACAAAGGGGACAACGCCTGGCAGATGATCTCGGCGACTCTGGTAGGGATTCAGAGTATGCCGGGGCTTGTCATTCTCTACGGTAGCATTGTGAAGAAGAAATGGGCCGTCAATTCTGCTTTCATGGCTCTCTATGCCTTCGCCGCCGTCAGCATCTGCTGGGTCACCTGGGCCTATAAGATGTCCTTCGGCGAGCAGCTTTTGCCCTTCTGGGGAAAGGCTGGACCGGCGCTTGGTCAGAAGTTTCTGGTCCGTCAGGCGGCGCTGCCGGCGACACCTCATTACCATAAGAACGGGGAGCTGGAGACGCCGGAGATAGAGCCCTTCTACCCGATGGCGACGATGGTGTGGTTTCAGTGCGTGTTCGCGGCCATCGCGGTGGTTATTCTGGCCGGATCGGTGCTGGCGAGGATGAATTTCAAAGCGTGGATGATGTTTGTGCCGTTGTGGCTGACGTTTTCGTACACCGTCGGCGCGTTCAGCTTGTGGGGTGGTGGTTTCTTGTTTCACTGGGGCGTCATGGATTACTCCGGCGGCTATGTCATCCATCTTTCTTCCGGGATTGCTGGTTTCACCGCCGCTTACTGGGTGGGACCGAGGTCGAAGAAAGATAGAGAGAGGTTTCCGCCGAACAATGTGTTACTGACGCTGGCGGGGGCGGGACTGCTGTGGCTGGGATGGGCCGGCTTCAACGGCGGCGATCCCTACTCGGCTAACACCGACTCGTCCATGGCGGTTCTCAACACCAACGTATGCGCCGCCACCAGTTTGCTGGTGTGGACCTGGCTTGACGTCATCTTCTTCAAGAAGCCCTCCGTCATCGGAGCCGTCCAGGGCATGATCACCGGTCTCGTCTGCATCACTCCGGGTGCCGGGCTGGTTCAAGGATGGGCAGCCGTGGTGATGGGAGCATTATCCGGCAGTGTGCCATGGTTCAGCATGATGATATTGGGCAAGAAACTCAAAATATTCCAAATGGTCGACGACACTCTCGCCGTCTTCCACACCCACGCCGTCGCCGGACTTCTCGGCGGTATCCTCACCGGCCTATTCGCGGAGCCTCGCCTGAGCGCTCTCTTCCTCCCCATCACCAACTCCAGAGGAGGCGTGTACGGCGGATCCGGCGGAGTCCAAATCCTCAAACAAATCGTGGGAGGGCTGTTCATCATAGGATGGAACCTGGTGGCGACATCCATCATCTGTGTGGCCATCAGTTATGTAATTCCTCTGAGGATGTCGGAGGAGGAATTGGTGATCGGAGACGACGCCGTCCACGGGGAAGAAGCTTATGCGTTGTGGGGCGACGGAGAGAAGTTGAGTTTATATTCTGACGATACTACTCACCACCAGGGAGTTTTAGCATCCTGTGGGGCCACTCAAGTCCTCTAA	1464	0.5731	MASPPVNSLPTAYQAGTSLAVPDWLNKGDNAWQMISATLVGIQSMPGLVILYGSIVKKKWAVNSAFMALYAFAAVSICWVTWAYKMSFGEQLLPFWGKAGPALGQKFLVRQAALPATPHYHKNGELETPEIEPFYPMATMVWFQCVFAAIAVVILAGSVLARMNFKAWMMFVPLWLTFSYTVGAFSLWGGGFLFHWGVMDYSGGYVIHLSSGIAGFTAAYWVGPRSKKDRERFPPNNVLLTLAGAGLLWLGWAGFNGGDPYSANTDSSMAVLNTNVCAATSLLVWTWLDVIFFKKPSVIGAVQGMITGLVCITPGAGLVQGWAAVVMGALSGSVPWFSMMILGKKLKIFQMVDDTLAVFHTHAVAGLLGGILTGLFAEPRLSALFLPITNSRGGVYGGSGGVQILKQIVGGLFIIGWNLVATSIICVAISYVIPLRMSEEELVIGDDAVHGEEAYALWGDGEKLSLYSDDTTHHQGVLASCGATQVL	487

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral970g00069	487	NCBIfam	ammonium transporter	29	455	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Pral970g00069	487	ProSitePatterns	Ammonium transporters signature.	200	225	IPR018047	GO:0008519\|GO:0016020\|GO:0072488
	Pral970g00069	487	Pfam	Ammonium Transporter Family	31	455	IPR024041	GO:0008519\|GO:0016020\|GO:0072488
	Pral970g00069	487	Gene3D	Ammonium transporter AmtB like domains	7	458	IPR029020	-
	Pral970g00069	487	PANTHER	AMMONIUM TRANSPORTER MEP2	16	464	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Pral970g00069	487	FunFam	Ammonium transporter	12	458	-	-
	Pral970g00069	487	PRINTS	Rhesus blood group protein signature	239	257	IPR002229	GO:0005886
	Pral970g00069	487	PRINTS	Rhesus blood group protein signature	325	343	IPR002229	GO:0005886
	Pral970g00069	487	PRINTS	Rhesus blood group protein signature	144	160	IPR002229	GO:0005886
	Pral970g00069	487	PRINTS	Rhesus blood group protein signature	270	292	IPR002229	GO:0005886
	Pral970g00069	487	SUPERFAMILY	Ammonium transporter	24	437	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral970g00069	Pral-Chr970	675381	679015	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral970g00069	137	475	Inorganic Solute Cotransporters	AT2G38290	71.386	4.07e-168	476

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral970g00069	K03320		-	gmx:100785993	896.345