Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral970g00014 ATGAAGCTGACCGGGGACAGCATGGCGTCCGACGAAGGGACGGGTGACTGCGACGGTGGTCGGACGGTCATCGTTGGGGTGAAGTTGGATCCTCGGAGCAGGGAATTGCTCACATGGGCTCTCGTCAAAGTGGCCGAGCCTGGTGACCATGTCATTGCGCTTCACGTTATCGGCAGTATGCCAGCGGGTACCGGATCGCTCCTCTCTCTTGTAAATACTTTTGATTCGGTTCTCGCCGTCTACGAAGGTTTCTGCAACTTGAAGCAGGTTGATCTCAAGCTGAAAGTCTGTAGAGGTGAGTCTGCTCGGAAACTTCTTGTACGGGAGGCGAAATCGTTTAATGCATCAACTGTAATTGTGGGGACTTCCAAAACGCATCACACAATCCGGTCATCGGCATCCGTTGCCAAGTATTGTGCGAAAAAATTGCCCAAATGCATCTCTGTCTTTGCGGTTGACAATGGCAAAATTGCATTCCACAGAGAGGCTACAAAAACATGTGGTGTTCAAGTAAAACCAAATGAAGGCCCAGCTTTGTCAAGAAAATCCTTCAAGCTTTGTACAAAGACAAATCTGAGGAACTGTGAATGTTGTGAGAGGGTGTTAGCACTTCCAGAGAGTACTGCTATTGAAGATTTGCCTGATGATCAGGAAAAGAAAGATTCACTGGCTTTAGTACCGTTCCAGAAAATTGGCGACGGTCATGGTCGTGCAACTGTGGTTAAGGAATCAAACCAGTCTAAACATGGTTGGTCTGTCCTTCGCCAGGTATTTCTGCCCAGAAAGCACATGCAGAAGTCGTATGTGAGCAATTCATATGTTTTTCAACGGGCAGTTAAACAGACCAGCTGGCATTCATCAGCCGTAGTCCATCCGGATCTTAAAAAAATTAATATTGACAAAAATGACAATTCTACCCTTGATGGGCAGAGTGGTGCCATTGTGCCATTCGGATCTGCTTCTAACTCTGGCTTCAGTAACTTTCATGAAGAATTGTCCAGCTTACAGGAGAAGTACTCATCCTCATGCAGAGTGTATAGTTTCCAAGAACTTGCTTCCGCAACTGCTAACTTCTCGCCTGAAAATTTGGTTGGCAAAGGCGGCAGTAGCTATGTTTATAAAGGATGTCTTCCAGATGGCAAGGAGGTTGCTGTGAAAATTTTGAAGCCATCAGAAGATGTGGTCAAAGAGTTTCTTCTGGAAATTGAGATCATCACAACTTTGCATCATAAGAACATAATATCTTTATCTGGGTTTTCTTTTGATGACAATAATTTGCTTTTGGTTTATGATTTTCTAACAAGAGGAAGCCTAGAAGAGAACATTCATGGTGATAAGAAGGACTCTAATGAATTTGGTTGGCAAGAGAGGTATAAGGTGGCTGTGGGTGTTGCTGAGGCATTGGAGTTTCTGCATAATGGCTGTGCACAGGCTGTGATTCACAGGGATGTAAAATCTTCAAACATCCTTCTTTCAGATAATTTTGAGCCTCAGCTCTCCGATTTTGGACTGGCCAGCTGGGGTTCTTCTTCATCCCATGTTACTTGTACTGATGTGGCAGGAACCTTTGGATACTTGGCTCCAGAGTACTTTATGCATGGTAGGGTAACTGACAGAATTGATGTATATGCTTTTGGTGTTGTGCTTCTTGAGCTTCTTTCTAGCAGGAAGCCCATCAATAACGAATCCCCTAAGGGCCAGGAGAGCCTTGTGATGTGGGCAAGACCAGTTCTAAAGGATGGAAAGCTCTCCCAGTTGCTTGATTCAAGCCTTGGCGATCCTGAACATTGGCTGATTGACAGAATGGGTTTGGCTGCTACCCTTTGCCTCAGACGATCACCTAAATCTCGACCTCAAATCAGCGTCATATTGAAACTTCTGCATGGTGATGATGAAGTCACAAGTTGGGCAAAACAAGAAGTTGGTGCACCAGAAGAACTTGATGCGCTCGATGGGGGACTGAATAATATTCAGTCCCACCTGAACCTTGCTTTGCTGGACCTGGACGATGATACGGTTTCTGTAAGTAGCTCTGAGCAGAGCGTCTCATTAGAGGACTATCTACAAGGAAGATGGAGTCGCTCGTCAAGTTTTGATTAA 2100 0.4524 MKLTGDSMASDEGTGDCDGGRTVIVGVKLDPRSRELLTWALVKVAEPGDHVIALHVIGSMPAGTGSLLSLVNTFDSVLAVYEGFCNLKQVDLKLKVCRGESARKLLVREAKSFNASTVIVGTSKTHHTIRSSASVAKYCAKKLPKCISVFAVDNGKIAFHREATKTCGVQVKPNEGPALSRKSFKLCTKTNLRNCECCERVLALPESTAIEDLPDDQEKKDSLALVPFQKIGDGHGRATVVKESNQSKHGWSVLRQVFLPRKHMQKSYVSNSYVFQRAVKQTSWHSSAVVHPDLKKINIDKNDNSTLDGQSGAIVPFGSASNSGFSNFHEELSSLQEKYSSSCRVYSFQELASATANFSPENLVGKGGSSYVYKGCLPDGKEVAVKILKPSEDVVKEFLLEIEIITTLHHKNIISLSGFSFDDNNLLLVYDFLTRGSLEENIHGDKKDSNEFGWQERYKVAVGVAEALEFLHNGCAQAVIHRDVKSSNILLSDNFEPQLSDFGLASWGSSSSHVTCTDVAGTFGYLAPEYFMHGRVTDRIDVYAFGVVLLELLSSRKPINNESPKGQESLVMWARPVLKDGKLSQLLDSSLGDPEHWLIDRMGLAATLCLRRSPKSRPQISVILKLLHGDDEVTSWAKQEVGAPEELDALDGGLNNIQSHLNLALLDLDDDTVSVSSSEQSVSLEDYLQGRWSRSSSFD 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral970g00014 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Pral970g00014 699 Gene3D HUPs 20 153 IPR014729 -
Pral970g00014 699 Gene3D Phosphorylase Kinase; domain 1 320 432 - -
Pral970g00014 699 SMART serkin_6 358 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral970g00014 699 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 327 432 - -
Pral970g00014 699 ProSitePatterns Protein kinases ATP-binding region signature. 364 386 IPR017441 GO:0005524
Pral970g00014 699 PANTHER OS08G0249100 PROTEIN 73 640 IPR046958 -
Pral970g00014 699 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 20 153 - -
Pral970g00014 699 Gene3D Transferase(Phosphotransferase) domain 1 433 643 - -
Pral970g00014 699 Pfam Universal stress protein family 21 145 IPR006016 -
Pral970g00014 699 Pfam Protein kinase domain 361 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral970g00014 699 ProSiteProfiles Protein kinase domain profile. 358 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral970g00014 699 SUPERFAMILY Protein kinase-like (PK-like) 338 627 IPR011009 -
Pral970g00014 699 CDD USP_Like 22 147 - -
Pral970g00014 699 FunFam Putative receptor-like serine/threonine-protein kinase 433 643 - -
Pral970g00014 699 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral970g00014 Pral-Chr970 176149 196056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral970g00014 346 698 Trihelix Transcription Factor Family AT1G70460 39.779 3.03e-73 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pral970g00014 Pkinase 8.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral970g00014 - - gmx:100815722 908.672