Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral967g00004 ATGGACTCAAAAACTAGTGCTAGAGCTGCCCAGAAACATCATCATAAGACGGCTGGGATTCAAACAATAGAGGCAAAAGACATCAAATCTTCAAAGACTGGGAAATCTGAACTGGCTGCGCCAGAAGATTTATCAAAATATGTTCAGGACTCGTTGAAGCAGTACACTGGAGACGCTTCTGAAAAGAAGAAGCTAGGGAGTTCAAACCCAAAGGAGTCTGCTGATTCCTTGATTAGTAAATTTGGTTCTTCTGTTTCCTTATCTGTTAGTGAACAACTATCTGGAGGAGTTGACCATGTTGTTAATGGGAATAGAGGTTTGCAGGAAAGCTCTATTGACCAAGAAAAGAAAACATCAGAATATGGAAGTGTGAAGAGTAGTTCTGTTTCTGCTAAAGTTAGTGATGGGGCCAGCAGCCTGGCAAAGACCAGTGGAAGTGCCAAGATTAGTGATCGAGTTGATCTTGTTGAGAGTGGCAAGAGTAGCATTTGCAGAGGAAGTACAAGCAGTGATGTGAGTGATGAGAGCACTTGCAGCAGCTTTAGTAGCAGTGTCAACAAGCCTCACAAGGCAAATGACTTGAGATGGGAAGCTATTCAAGCCGTCCGAGCTAAAGATGGAGTTTTGGGCTTAGCTCACTTTAGACTACTGAAGAGGTTGGGTTGTGGGGATATTGGGAGCGTTTATCTCTCAGAACTGAGTGGAACTAAATGTTATTTCGCAATGAAGGTAATGGATAAAGGGTCTTTAGCTAGTCGTAAAAAGCTGCTTCGTGCTCAGACAGAAAGAGAAATACTGCAATCACTTGATCATCCTTTTCTCCCGACATTGTATACCCATTTTGAGACAGAGAAGTTCTCATGCTTGGTAATGGAATTCTGCCCAGGTGGAGACCTGCACACTCTCAGGCAGAGGCAGCCAGGGAAGCATTTTCCTGAGCAAGCAGTAAAATTTTACGTGGCAGAGGTGCTGCTGGCGTTGGAGTACCTCCACATGCTTGGCATTGTCTACCGTGATCTCAAGCCAGAAAATGTCCTTGTTAGGGATGATGGGCACATTATGCTCTCAGACTTTGACCTTTCCCTCCGTTGTGCCGTTAGTCCCACTCTTGTTAAAAGTTCAGTCATGGAATCTGATCCTTTAAGGAAGAATCCTGTATATTGTGTGCAACCTGCGTGTATTGAACCGCCTTCCTGCATCCAGCCATCCTGCGTTGCTCCTACAACATGCTTCTCACCTCGGCTCTTTTCTAGCAAATCAAAGAAGGATAGGAAACCCAAAACTGAAATTGGAAACCAAGTGACTCCATTGCCTGAGCTCATTGCTGAGCCTACCGATGCACGATCCATGTCATTTGTTGGAACCCATGAATATTTGGCACCTGAGATCATCAAGGGAGAAGGTCATGGGAGTGCGGTTGATTGGTGGACTTTTGGAATCTTTCTATATGAGCTTTTGTTTGGTAAGACTCCTTTCAAGGGTTCTGGGAACCGAGCTACATTGTTTAATGTTGTAGGCCAGCCTCTCCGATTTCCAGAAGCACCTGTTGTAAGTTTTGCAGCAAGGGATCTCATAAGGGGGCTGCTTGTGAAGGAACCCCAGCACAGGTTGGCATATAAACGAGGCGCCACTGAGATAAAGCAACATCCCTTTTTTGAAGGTGTGAATTGGGCACTTATTCGCTGCGCCACCCCACCAGAGATCCCAAAGCCTGTAGAGTATGAGAAGATACCTTCCCCAGCCTCATCAGCGGCCGAAAAGGCCAGCAACCATATGTCAATTGCCGATCAGAAAGGCTCTGGTAATTATCTTGAGTTTGATTTCTTCTAG 1830 0.453 MDSKTSARAAQKHHHKTAGIQTIEAKDIKSSKTGKSELAAPEDLSKYVQDSLKQYTGDASEKKKLGSSNPKESADSLISKFGSSVSLSVSEQLSGGVDHVVNGNRGLQESSIDQEKKTSEYGSVKSSSVSAKVSDGASSLAKTSGSAKISDRVDLVESGKSSICRGSTSSDVSDESTCSSFSSSVNKPHKANDLRWEAIQAVRAKDGVLGLAHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQRQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSSVMESDPLRKNPVYCVQPACIEPPSCIQPSCVAPTTCFSPRLFSSKSKKDRKPKTEIGNQVTPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEYEKIPSPASSAAEKASNHMSIADQKGSGNYLEFDFF 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral967g00004 609 PANTHER FLIPPASE KINASE 1-RELATED 29 576 - -
Pral967g00004 609 CDD STKc_phototropin_like 213 571 - -
Pral967g00004 609 FunFam Serine/threonine-protein kinase AGC1-7 445 570 - -
Pral967g00004 609 FunFam serine/threonine-protein kinase D6PK-like 298 365 - -
Pral967g00004 609 Pfam Protein kinase domain 449 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral967g00004 609 Pfam Protein kinase domain 215 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral967g00004 609 Gene3D Phosphorylase Kinase; domain 1 212 297 - -
Pral967g00004 609 MobiDBLite consensus disorder prediction 1 76 - -
Pral967g00004 609 MobiDBLite consensus disorder prediction 99 125 - -
Pral967g00004 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 335 347 IPR008271 GO:0004672|GO:0006468
Pral967g00004 609 SUPERFAMILY Protein kinase-like (PK-like) 192 579 IPR011009 -
Pral967g00004 609 SMART serkin_6 214 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral967g00004 609 Gene3D Transferase(Phosphotransferase) domain 1 298 365 - -
Pral967g00004 609 Gene3D Transferase(Phosphotransferase) domain 1 446 570 - -
Pral967g00004 609 MobiDBLite consensus disorder prediction 17 33 - -
Pral967g00004 609 FunFam Serine/threonine-protein kinase D6PK-like 212 297 - -
Pral967g00004 609 ProSiteProfiles Protein kinase domain profile. 214 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral967g00004 Pral-Chr967 36866 40919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral967g00004 61 609 AGC Kinase Gene Family AT5G47750 80.399 0.0 878
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pral967g00004 Pkinase 1.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral967g00004 K08286 - gmx:100781600 995.727