Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral965g00002 ATGACGAAACACCAAGACGACCTCGATCTCGATCTCCTCCTCTCCCTTCAAGACAGGGTTTTGGAAACTCCTCCGACTTCTCCCTCACTCCATTCACCGGGTTACTTATCCGACGATGGCTCGCCCACGCAAAGGGAGACGGTTGATATGTCGGTATTTAGAAATGCTGTTCAGGATTGTCTTGAAGACGAAACCAAAGCATATAAAAAACCTGAGAAGTTGAATAGGCCGGTGAACAAGAAATCAGATCATATCGAGGTCGAGAAATTTTCTGGTCTGCGAATAAGGAACCAATCGGTAACCTCTGCAGAGCTCAGGGAACGCTTTTCAGACATTCGTTTTGTTCGGCTACCAGTAATCAAGAATTTGATGATAGGAGATACTATTTCTGGATGTTGGGCGACGGTTGGAGTACTGACAGAGAAAGGAAGTCCCAAGACAAGTTCGACAGGGAAGAGTTTCTGTATATGGAAAATTGGGAGTTTGGATGAAAGTAATATTTCTCTTTTCTTGTTCGGTGATGCTTATAAGAGGAACTCGCAAGAACATGCAGGGACGCTCTTTGCATTGTTTAACTGTTCAGTACGCAAGGATGCTATGGGTAATGGTTTTTCATTGAGTGTATATTCCCCAAGTCAAATTTTGAAGATAGGAACTTCTATTGATTACGGAGTTTGCAAGGGAAAACGAAACGACGGGATGCCTTGTACGTTGGTTGTAAATATACGTCAAGGGATATATTGTAAATATCATAAATCGAAATCATCAAAAGAGTACTCCACAATGAGAACTGAACTCAAGGGAGGGAACTTAAAAACAGCATTTAGGCCTAGGGATTATCTCAAGTCAGAAGGAATCTACTTAGTTGATCCTGTTATTGGCAAAACAAACCCAACGAAATCTCAGCCACTAAAGTTGTTGTCAGTGGATGCTCTTAAAAAGGCATTGAGCAATGCTGACAAAGTGACAACAAATATGCATTCGCAAGGGATCAGATTTCTTTCAGAGGCAAGCCTGACTCTAAGGCAGTGA 1032 0.4215 MTKHQDDLDLDLLLSLQDRVLETPPTSPSLHSPGYLSDDGSPTQRETVDMSVFRNAVQDCLEDETKAYKKPEKLNRPVNKKSDHIEVEKFSGLRIRNQSVTSAELRERFSDIRFVRLPVIKNLMIGDTISGCWATVGVLTEKGSPKTSSTGKSFCIWKIGSLDESNISLFLFGDAYKRNSQEHAGTLFALFNCSVRKDAMGNGFSLSVYSPSQILKIGTSIDYGVCKGKRNDGMPCTLVVNIRQGIYCKYHKSKSSKEYSTMRTELKGGNLKTAFRPRDYLKSEGIYLVDPVIGKTNPTKSQPLKLLSVDALKKALSNADKVTTNMHSQGIRFLSEASLTLRQ 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral965g00002 343 PANTHER PROTEIN MCM10 HOMOLOG 40 319 IPR040184 GO:0003690|GO:0003697|GO:0006270
Pral965g00002 343 MobiDBLite consensus disorder prediction 22 45 - -
Pral965g00002 343 Pfam Primase zinc finger 218 263 IPR015408 GO:0005634|GO:0006260
Pral965g00002 343 Gene3D - 78 252 IPR012340 -
Pral965g00002 343 FunFam DNA replication licensing factor mcm10 79 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral965g00002 Pral-Chr965 7610 10348 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral965g00002 19 336 Core DNA Replication Machinery Family AT2G20980 60.815 4.29e-135 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral965g00002 K10736 - qsa:O6P43_011458 467.618