Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral965g00001 ATGACGAAACACCAAGACGACCTCGATCTCGATCTCCTCCTCTCCCTTCAAGACAGGGTTTTGGAAACTCCTCCGACTTCTCCCTCACTCCATTCACCGGGTTACTTATCCGACGATGGCTCGCCCACGCAAAGGGAGACGGTTGATATGTCGGTATTTAGAAATGCTGTTCAGGATTGTCTTGAAGACGAAACCAAAGCATATAAAAAACCTGAGAAGTTGAATAGGCCGGTGAACAAGAAATCAGATCATATCGAGGTCGAGAAATTTTCTGGTCTGCGAATAAGGAACCAATCGGTAACCTCTGCAGAGCTCAGGGAACGCTTTTCAGACATTCGTTTTGTTCGGCTACCAGTAATCAAGAATTTGATGATAGGAGATACTATTTCTGGATGTTGGGCGACGGTTGGAGTACTGACAGAGAAAGGAAGTCCCAAGACAAGTTCGACAGGGAAGAGTTTCTGTATATGGAAAATTGGGAGTTTGGATGAAAGTAATATTTCTCTTTTCTTGTTCGGTGATGCTTATAAGAGGAACTCGCAAGAACATGCAGGGACGCTCTTTGCATTGTTTAACTGTTCAGTACGCAAGGATGCTATGGGTAATGGTTTTTCATTGAGTGTATATTCCCCAAGTCAAATTTTGAAGATAGGAACTTCTATTGATTACGGAGTTTGCAAGGGAAAACGAAACGACGGGATGCCTTGTACGTTGGTTGTAAATATACGTCAAGGGATATATTGTAAATATCATAAATCGAAATCATCAAAAGAGTACTCCACAATGAGAACTGAACTCAAGGGAGGGAACTTAAAAACAGCATTTAGGCCTAGGGATTATCTCAAGTCAGAAGGAATCTACTTAGTTGATCCTGTTATTGGCAAAACAAACCCAACGAAATCTCAGCCACTAAAGTTGTTGTCAGTGGATGCTCTTAAAAAGGCATTGAGCAATGCTGACAAAGTGACAACAAATATGCATTCGCAAGGGATCAGATTTCTTTCAGAGGTCACAGGCAAGCCTGACTCTAAGGCAGTGAAGAGAAAACAAATGATGCCAAATGAGCAAAGCAAGTGCATTGATAAGAGGAAAGCGTCGTCATTAAACGAGGGATCCCCTGCAACAACATACGGACACTTAGGTGCCAAAAGAATAAAAGCCGAAGGGCAAGCATCGGCTGATAAAACCACAAGGGGTAGTGGAAAGATGATCGAATTAGACCTTGTTAGTTCAGATGAGGACATCTGA 1248 0.4247 MTKHQDDLDLDLLLSLQDRVLETPPTSPSLHSPGYLSDDGSPTQRETVDMSVFRNAVQDCLEDETKAYKKPEKLNRPVNKKSDHIEVEKFSGLRIRNQSVTSAELRERFSDIRFVRLPVIKNLMIGDTISGCWATVGVLTEKGSPKTSSTGKSFCIWKIGSLDESNISLFLFGDAYKRNSQEHAGTLFALFNCSVRKDAMGNGFSLSVYSPSQILKIGTSIDYGVCKGKRNDGMPCTLVVNIRQGIYCKYHKSKSSKEYSTMRTELKGGNLKTAFRPRDYLKSEGIYLVDPVIGKTNPTKSQPLKLLSVDALKKALSNADKVTTNMHSQGIRFLSEVTGKPDSKAVKRKQMMPNEQSKCIDKRKASSLNEGSPATTYGHLGAKRIKAEGQASADKTTRGSGKMIELDLVSSDEDI 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral965g00001 415 MobiDBLite consensus disorder prediction 22 45 - -
Pral965g00001 415 Pfam Primase zinc finger 218 263 IPR015408 GO:0005634|GO:0006260
Pral965g00001 415 Gene3D - 78 252 IPR012340 -
Pral965g00001 415 PANTHER PROTEIN MCM10 HOMOLOG 41 397 IPR040184 GO:0003690|GO:0003697|GO:0006270
Pral965g00001 415 MobiDBLite consensus disorder prediction 352 415 - -
Pral965g00001 415 FunFam DNA replication licensing factor mcm10 79 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral965g00001 Pral-Chr965 7132 10348 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral965g00001 19 414 Core DNA Replication Machinery Family AT2G20980 55.000 3.57e-141 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral965g00001 K10736 - qsa:O6P43_011458 526.939