Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral964g00008 ATGACATCTCTTTCATTCATTCAAATCAATGTTCCAACATCACATTCTTCTCCCTATATAAGCCTCACTTCCAACCACAATTTCCTAACAAGTTCGAAGCTGAGTTCTCTTCCAATTTCCTCCGGCGGACAATTTGTCAAGCGCATGGAGTACAGCATTCCTCCCCCCAGCAACCTCACCTCATCAACAGCGTCATCCTCGAAGGCGAAGAAAAAGAGCGGGAAGAAAAGCAAGGGAGGTGTGAAGCTTTCCACCGATCCACAGAGCGTGGCAGCTCGAGAACGAAGGCACCGGATCAGCGATCGGTTCAAGATCTTGCAGAGCATGGTTCCTGGTGGGAGCAAGATGGACACAGTGTCGATGTTAGAGGAAGCGATTCATTACGTGAAGTTTCTGAAAACTCAGATATGGCTCCACCAAACCATGATTAACTCTGTCGACGATGACTACCTTTCATTTCCCAACCATGAACAGTTCCCTTCTCTTCAACTAAACCCACCTTCTTCTTCTTCAGTGGGTTCTGTGCAGAATTTGACGCAGATACCACTGGAAGAACAGTATTGCTGCTTCGAAAACGAAGTTACTGCAACAATACTGGACGCCAATATGAACTATTGGCCGGCTTAG 627 0.4673 MTSLSFIQINVPTSHSSPYISLTSNHNFLTSSKLSSLPISSGGQFVKRMEYSIPPPSNLTSSTASSSKAKKKSGKKSKGGVKLSTDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMINSVDDDYLSFPNHEQFPSLQLNPPSSSSVGSVQNLTQIPLEEQYCCFENEVTATILDANMNYWPA 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral964g00008 208 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 83 132 IPR011598 GO:0046983
Pral964g00008 208 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 23 192 IPR045843 GO:0003700|GO:0006355
Pral964g00008 208 FunFam Transcription factor LAX PANICLE 86 149 - -
Pral964g00008 208 SMART finulus 89 138 IPR011598 GO:0046983
Pral964g00008 208 Pfam Helix-loop-helix DNA-binding domain 93 132 IPR011598 GO:0046983
Pral964g00008 208 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 88 142 IPR036638 GO:0046983
Pral964g00008 208 MobiDBLite consensus disorder prediction 54 68 - -
Pral964g00008 208 MobiDBLite consensus disorder prediction 50 96 - -
Pral964g00008 208 CDD bHLH_AtIND_like 84 143 - -
Pral964g00008 208 Gene3D - 88 141 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral964g00008 Pral-Chr964 57219 57869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral964g00008 75 153 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 51.899 5.43e-23 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral964g00008 HLH 7.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral964g00008 - - qsa:O6P43_016570 160.614