Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral963g00003 ATGAGCTGCTTCTCTTGCATTAGTCATCGCCGTTCAGATGCCAGCAGAATCCAAATTGATAATGCTCCTCGATCTACCTCTTCTTCCGGGACTGGGCGCTCCAAATCTCATGCCCATAGTGGCGACGATAGAAGCAAGGGAGGATCCTATGATGGGAAGGGGAAGAATGGCGTCGCCGGCAGCCCAAAAAGCAGTGCTGCCCGTAGTTTCACTTTCCGTGAACTTGCAGCGGCAACCAGGGGCTTCAAGCCAGTGAATTTGATTGGGGAAGGAGGTTTTGGAAGGGTTTACAAAGGTCGTCTTGATACAGGCCAGCTTGTTGCCGTCAAACAGTTAAATCACGATGGTCATCAAGGTTTTCAGGAATTCATAGTGGAGGTTCTCATGTTAAGCCTGCTACACCATTCTAATCTTGTCACCTTGTTTGGTTACTGCACCGACGGAGATCAAAGGCTTTTGGTTTATGAATATATGCCTATGGGTAGCCTGGAAGATCATCTTTTTGATATAAAACCAAACCAAGAGCTGCTAAGTTGGAATGATCGGATGAAGATTGCTGTTGGAGCTGCACGAGGGCTTGAGTACCTTCATTGTAAAGCAAATCCTCCTGTTATCTATCGGGACTTGAAATCTGCAAACATATTATTAGACAATGACTTCAACCCAAAACTCTCAGATTTTGGGCTTGCTAAACTTGGTCCTGTTGGAGACAATACTCATGTTTCAACCAGAGTGATGGGAACATATGGCTACTGTGCCCCAGAATATGCCATGAGTGGCAAACTGACTCTTAAATCTGATATCTATAGCTTTGGTGTGGTTTTGATGGAGTTGATTACTGGACGAAGGGCAATAGATGTCAGTAAGAAGCCGGGGGAGCAAAACTTAGTTGCATGGTCTCGACAGTTTCTCAGGGACCGGAGCAAGTTTGTACAGTTGGTTGATCCTCGTCTTGACGGACAATTCCCCTTGCGCTGTTTGCATCATGCGATTGCTATCACTGCAATGTGTCTGCAAGAGCAACCGAATTTCCGCCCACTTATTGGTGATATTGTTGTTGCACTGGAATACTTGCACTCGCAGAGTAAAGCCTCAGAAGTCCTTAAAGGTGGGGAGCAATGTCTGCCACGTCGATCGCCATCGCAACTGGACCAATATTGTTTGGAGGAATCAAATTCAAGACTGAGGTCAACTTCCGCCTAA 1203 0.4622 MSCFSCISHRRSDASRIQIDNAPRSTSSSGTGRSKSHAHSGDDRSKGGSYDGKGKNGVAGSPKSSAARSFTFRELAAATRGFKPVNLIGEGGFGRVYKGRLDTGQLVAVKQLNHDGHQGFQEFIVEVLMLSLLHHSNLVTLFGYCTDGDQRLLVYEYMPMGSLEDHLFDIKPNQELLSWNDRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLMELITGRRAIDVSKKPGEQNLVAWSRQFLRDRSKFVQLVDPRLDGQFPLRCLHHAIAITAMCLQEQPNFRPLIGDIVVALEYLHSQSKASEVLKGGEQCLPRRSPSQLDQYCLEESNSRLRSTSA 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral963g00003 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Pral963g00003 400 FunFam Serine/threonine-protein kinase PBS1 158 372 - -
Pral963g00003 400 ProSitePatterns Protein kinases ATP-binding region signature. 88 110 IPR017441 GO:0005524
Pral963g00003 400 Pfam Protein kinase domain 85 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral963g00003 400 CDD STKc_IRAK 88 356 - -
Pral963g00003 400 PANTHER OS07G0668900 PROTEIN 3 365 - -
Pral963g00003 400 FunFam probable serine/threonine-protein kinase RLCKVII 55 157 - -
Pral963g00003 400 SUPERFAMILY Protein kinase-like (PK-like) 62 357 IPR011009 -
Pral963g00003 400 ProSiteProfiles Protein kinase domain profile. 82 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral963g00003 400 SMART serkin_6 82 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral963g00003 400 MobiDBLite consensus disorder prediction 15 65 - -
Pral963g00003 400 MobiDBLite consensus disorder prediction 15 35 - -
Pral963g00003 400 Gene3D Phosphorylase Kinase; domain 1 56 157 - -
Pral963g00003 400 Gene3D Transferase(Phosphotransferase) domain 1 158 374 - -
Pral963g00003 400 MobiDBLite consensus disorder prediction 36 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral963g00003 Pral-Chr963 79 3261 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral963g00003 1 365 Glycoside Hydrolase AT3G07070 57.297 4.68e-151 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pral963g00003 Pkinase 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral963g00003 - - qsa:O6P43_016368 610.142