Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral963g00002 ATGTTAAGCCTGCTACACCATTCTAATCTTGTCACCTTGTTTGGTTACTGCACCGACGGAGATCAAAGGCTTTTGGTTTATGAATATATGCCTATGGGTAGCCTGGAAGATCATCTTTTTGATATAAAACCAAACCAAGAGCTGCTAAGTTGGAATGATCGGATGAAGATTGCTGTTGGAGCTGCACGAGGGCTTGAGTACCTTCATTGTAAAGCAAATCCTCCTGTTATCTATCGGGACTTGAAATCTGCAAACATATTATTAGACAATGACTTCAACCCAAAACTCTCAGATTTTGGGCTTGCTAAACTTGGTCCTGTTGGAGACAATACTCATGTTTCAACCAGAGTGATGGGAACATATGGCTACTGTGCCCCAGAATATGCCATGAGTGGCAAACTGACTCTTAAATCTGATATCTATAGCTTTGGTGTGGTTTTGATGGAGTTGATTACTGGACGAAGGGCAATAGATGTCAGTAAGAAGCCGGGGGAGCAAAACTTAGTTGCATGGTCTCGACAGTTTCTCAGGGACCGGAGCAAGTTTGTACAGTTGGTTGATCCTCGTCTTGACGGACAATTCCCCTTGCGCTGTTTGCATCATGCGATTGCTATCACTGCAATGTGTCTGCAAGAGCAACCGAATTTCCGCCCACTTATTGGTGATATTGTTGTTGCACTGGAATACTTGCACTCGCAGAGTAAAGCCTCAGAAGTCCTTAAAGGTGGGGAGCAATGTCTGCCACGTCGATCGCCATCGCAACTGGACCAATATTGTTTGGAGGAATCAAATTCAAGACTGAGGTCAACTTCCGCCTAA 819 0.4432 MLSLLHHSNLVTLFGYCTDGDQRLLVYEYMPMGSLEDHLFDIKPNQELLSWNDRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLMELITGRRAIDVSKKPGEQNLVAWSRQFLRDRSKFVQLVDPRLDGQFPLRCLHHAIAITAMCLQEQPNFRPLIGDIVVALEYLHSQSKASEVLKGGEQCLPRRSPSQLDQYCLEESNSRLRSTSA 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral963g00002 272 SMART serkin_6 1 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral963g00002 272 SUPERFAMILY Protein kinase-like (PK-like) 2 229 IPR011009 -
Pral963g00002 272 PANTHER OS07G0668900 PROTEIN 1 237 - -
Pral963g00002 272 ProSiteProfiles Protein kinase domain profile. 1 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral963g00002 272 Gene3D Transferase(Phosphotransferase) domain 1 31 246 - -
Pral963g00002 272 FunFam Serine/threonine-protein kinase PBS1 30 244 - -
Pral963g00002 272 Pfam Protein kinase domain 2 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral963g00002 272 ProSitePatterns Serine/Threonine protein kinases active-site signature. 76 88 IPR008271 GO:0004672|GO:0006468
Pral963g00002 272 Gene3D Phosphorylase Kinase; domain 1 1 30 - -
Pral963g00002 272 PIRSF ILK 1 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral963g00002 Pral-Chr963 33 2327 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral963g00002 1 237 Glycoside Hydrolase AT3G07070 65.401 5.03e-115 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pral963g00002 Pkinase 3.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral963g00002 - - qsa:O6P43_016368 449.129