Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral960g00120 ATGGAAGGTTCAGGAAGTCCCTTCTTTCCCCCTGCAGGCCACCACCACCACCACCAACAACCCGCAAGCTCCGGTGGTTTGAATCTCTCGGGCGCAGCGAACCCTGCCGGACACGGCGGAGCTCCGGTCAACTCAGACCAGGATCAGCAGCAGCAGCAGCCCGCGCAGCGCTCGGTGATGAGAGAACAGGACCAGTACATGCCGATCGCAAACGTTATCAGAATCATGCGTCGGGTCCTTCCGTCGCATGCTAAGATCTCCGACGAAGCCAAAGAGACGGTCCAGGAGTGTGTCTCCGAGTACATAAGCTTCATCACCAGCGAGGCCAACCAGCGTTGCCGGCAGGAGCAGCGCAAGACGGTGACGGCGGACGACGTGCTTTGGGCTATGGAGAAGCTGGGCTTCGACGACTACGTCGGGCCTCTTCACTCTACCTCCATCGTTACCGTAATGGTGGCGGTGGTTCCGGTAGTTCCAGTGGCCACTATGTCCCACGGGGACAGCAAGTGCAGGCTTCGGAGCTCGCACCAATAA 534 0.5974 MEGSGSPFFPPAGHHHHHQQPASSGGLNLSGAANPAGHGGAPVNSDQDQQQQQPAQRSVMREQDQYMPIANVIRIMRRVLPSHAKISDEAKETVQECVSEYISFITSEANQRCRQEQRKTVTADDVLWAMEKLGFDDYVGPLHSTSIVTVMVAVVPVVPVATMSHGDSKCRLRSSHQ 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral960g00120 177 MobiDBLite consensus disorder prediction 1 63 - -
Pral960g00120 177 PRINTS CCAAT-binding transcription factor subunit A signature 94 112 - -
Pral960g00120 177 PRINTS CCAAT-binding transcription factor subunit A signature 113 131 - -
Pral960g00120 177 SUPERFAMILY Histone-fold 36 139 IPR009072 GO:0046982
Pral960g00120 177 Gene3D Histone, subunit A 53 147 IPR009072 GO:0046982
Pral960g00120 177 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 44 143 IPR027113 GO:0001228|GO:0006355|GO:0016602
Pral960g00120 177 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 67 130 IPR003958 -
Pral960g00120 177 MobiDBLite consensus disorder prediction 43 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral960g00120 Pral-Chr960 789340 791149 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral960g00120 5 142 CCAAT-HAP3 Transcription Factor Family AT1G21970 58.904 4.39e-50 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Pral960g00120 CBFD_NFYB_HMF 1.3e-24 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral960g00120 K08065 - csv:116402762 159.844