Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral960g00097 ATGGGTTTATCTAAAGTTTCAGTTGTGGTTTTCTGGGTTTGTGTTCAGTTGATGAATAATTTGGCAGAAGGTCTCTCGTCCTGCCACCAAAACCATGTCAGTAACTACATTAGCTGGAAGGATTTGTGGGTGGATGAGCAGAGGTTGACCCGGGACCCCATTGACGATTCCCGGGTTATTGTCGTTGACCAGCATGGCAGAGGACATTCTAGGACTGTACAAGGAGCTGTCGATATGGTTCCTGATAACAACTCAGAAAGAATCAAAATTTACATATACCCTGGAATTTACAGAGAGAGAGTGTATGTGCCGAGAGCCAAGGGGTGTGTGTCAATGATAGGAGGACGAAATGAAACAGCGGGTGCAGTGATTACGTGGAACAGTAAATCATCGGACAGAGGCTTTGATGGACAAGAACTGGGGACCTATGCTTCTTCAACTGTGACTGTAGAATCTGACTATTTCTGTGCAACCAGGCTCACTTTTGAGAACTCGGCAGTGGCGGTGAATGGAGGAAATGGAATGCAAGGAGTGGCACTAAGGGTGGACAGTGAAAGGGCCGTGTTTTATAGGGTGAGGATCAAAGGGGAACAAGACACTCTGTTGGACAACACAGGCACTCATTATTTCTATCATTGTCATATCCAAGGCAAAATTGATTTCATATTTGGCCATGCAAAATCACTCTACCAGAATTGTCATCTTCATTCAATAGCAGAGACGTATGGAGCTATAGCAGCACATCACAGGGATACAGAAAATGAAGACACAGGCTTCTCCTTTGTAAATTGCTCCATCACAGGCACTGGCAGTGTCTATCTTGGCAGGGCCTGGGGTGATTACTCCAGAATCATCTACTCTTTCTGCTATATGGATGATATCATCATCCCAGAAGGCTGGACTGACTGGAACCATCCAGACAGACAGATGACTGCTGTGTTTGGGGAGTACCAGTGTGAGGGAGACGGAGCAGATAGGAGAGGAAGGGTAGAATGGTCAAAATGTTTGAGCTATGAAGAAGCAAGGCCTTTTCTGGATAAGAGTTTCATAAATGGGGACCAGTGGCTTAGGCTATAG 1077 0.4559 MGLSKVSVVVFWVCVQLMNNLAEGLSSCHQNHVSNYISWKDLWVDEQRLTRDPIDDSRVIVVDQHGRGHSRTVQGAVDMVPDNNSERIKIYIYPGIYRERVYVPRAKGCVSMIGGRNETAGAVITWNSKSSDRGFDGQELGTYASSTVTVESDYFCATRLTFENSAVAVNGGNGMQGVALRVDSERAVFYRVRIKGEQDTLLDNTGTHYFYHCHIQGKIDFIFGHAKSLYQNCHLHSIAETYGAIAAHHRDTENEDTGFSFVNCSITGTGSVYLGRAWGDYSRIIYSFCYMDDIIIPEGWTDWNHPDRQMTAVFGEYQCEGDGADRRGRVEWSKCLSYEEARPFLDKSFINGDQWLRL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral960g00097 358 SUPERFAMILY Pectin lyase-like 57 356 IPR011050 -
Pral960g00097 358 FunFam Pectinesterase 55 358 - -
Pral960g00097 358 Gene3D - 58 358 IPR012334 -
Pral960g00097 358 Pfam Pectinesterase 60 353 IPR000070 GO:0030599|GO:0042545
Pral960g00097 358 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 55 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral960g00097 Pral-Chr960 607593 609630 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral960g00097 3 309 Carbohydrate Esterase AT5G55590 55.046 2.06e-126 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral960g00097 K01051 - gmx:100813382 479.944