Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral960g00081 ATGGCTCCCACAGATTTCAACAGCCATGTAAACGGACCATCTATGCAAACACAAGGTTCAAGCCAAGCTCAATCTTCTGCTTCATCACCATTAGTGAAAAGTGAGATGGCAATGCCGTCAAATGAATTAAGTTTATCATCACCTGTCCAAATGGTTTGTTCTGATGTTACTGCTCTTGTTCAAGCCGATATGGATGGCTCTAACCCCCGAGGCAATGTAGCTAATGGGCTTCAAGCTTCACAAGTCGAAGTGAAAGACAGTGCTATCTCAGTTGCTGAGAGAACATCTGATGATGGGTATAATTGGCGAAAATATGGGCAGAAGCATGTTAAAGGGAGTGAATTTCCACGCTGCTATTACAAATGTACACATCCTAACTGTGAGGTCAAAAAGCTGTTCGAACGTTCTCATGATGGGCAGATCACTGAGATAATTTACAAGGGATCCCATGATCATCCTAAACCTCAACCAAGTCGCCGATACTCTTCTGGCACTATTATGTCTATGCATGAGGAGAGATTTGAGAAGCCTTCATCTTTGTCTGGCCAAGATGGTAACCAATCAAATGCGTTGCATTAG 579 0.4301 MAPTDFNSHVNGPSMQTQGSSQAQSSASSPLVKSEMAMPSNELSLSSPVQMVCSDVTALVQADMDGSNPRGNVANGLQASQVEVKDSAISVAERTSDDGYNWRKYGQKHVKGSEFPRCYYKCTHPNCEVKKLFERSHDGQITEIIYKGSHDHPKPQPSRRYSSGTIMSMHEERFEKPSSLSGQDGNQSNALH 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral960g00081 192 ProSiteProfiles WRKY domain profile. 91 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral960g00081 192 SUPERFAMILY WRKY DNA-binding domain 93 155 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral960g00081 192 SMART WRKY_cls 96 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral960g00081 192 Gene3D WRKY domain 81 156 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral960g00081 192 Pfam WRKY DNA -binding domain 97 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral960g00081 192 FunFam WRKY transcription factor 83 156 - -
Pral960g00081 192 MobiDBLite consensus disorder prediction 1 44 - -
Pral960g00081 192 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 25 175 IPR044810 GO:0003700
Pral960g00081 192 MobiDBLite consensus disorder prediction 145 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral960g00081 Pral-Chr960 502248 504853 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral960g00081 77 184 WRKY Transcription Factor Family AT4G26640 69.444 2.81e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral960g00081 WRKY 4.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral960g00081 - - gmx:100781491 261.151