Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral960g00080 ATGGATCTGGACTCGTTCTTCAGTTCAGTCAACGTCGCCGCCGTCTTCCTAATTACGGCAATATCACTGCTTTTTCTCAAGATAGTACTGAAAGCCACCTGGAGATCATGTTCGCAGAAGCTTCCGCCTGGGCCATGGAGGCTTCCTGTGATTGGGAGTGTCCACCATCTGGCCGGCGCTCTGCCGCACCATGGGTTCAGAGAGCTGTCGACGAAATACGGGGCGGTGATGTGGCTTCAGCTGGGGGAAACGCCGACGGTTGTGGTGTCGTCGGCGGAAGCGGCGAAAGAGGTACTGAGAACTCATGATGTGATATTTGCTCAGAGGCCTCATCTTCCCGCCGCCGATGTTGTGCTCTATGGCTCCACCAACATCACTTTCTCTCCTGTCGGAGACCACTGGAAGCTTCTCAGAAAAATTTGCTCTCTAGAGATGGTAAATGCCAAGCGAGTAAGATCATTCCAACCACTAAGAGAGAAAGTAGTGTCAAGTCTGATGACACAATTATCAGAACAAGCAAGATCTTCATCACTGGTGAATCTGAGTGAGAAAATCTACACCACCATCTTTGATATCACTTCAAAGGCAGCTTTTGGGGAGAACTACAAATCACGAGACGAGCTTTTCTTCATCTCTGAGATAATGTTGAAGTCATCAGAAAGCAGAAGCATTTGCGACATATTCCCTTCGCAGAATTGGCTCGCTGTGATCTCAGGAATGAAGGGCAAGTGGGAGACGATGCATCGCATGGCTGATACAGTTCTTGAGAAGATAACAAGTGGAGTTGGAGCAACATCATCTAAGGTTGTCGGAGGTGAAGCAGATTGTCTTCTTTCTGCTCTGTTGAATGCTAAGGAAGATGGTAGTCTTACATCAGACAACGTCAAAGCCGTCATGTTGGACATGATTCTGGGAGGGACTGAGACCTCATCCACGATAATAGAATGGGCAATGGCTGAACTACTGAGAAACCCTAGATTGATGAAGAAGACACAAGCAGAAATCAGACAAGTAGTTTCCGACAACAAAGGATGTATCGACGAGACAACTCTTGAGAATCTAAGGTATCTTAAAGCAGTGATCAAGGAAACTCTGAGACTGCATCCTCCAGCTCCATTTCTGATCCCAAGAGAGTGCACACAGACTTGTGAGATCAATGGGTACACAATACCAGTTGGAACACAAGTTCTTGTGAACGTTTGGGCCATTGGGAGAGACCCTGATTATTGGAGCTTAGCAGAAGAGTTTTTGCCAGACAGATTCTTGAACCTTGCTATAGATTACAAAGGTTTCAACTTTGAGTACTTACCATTTGGTTCTGGGAAGAGGATATGTCCTGGGATGTTATTTGGTGTGGCCAGTGTGGAGATAGTTCTTGCTCACTTGCTTTGTCGTTTTGACTGGGAGCTTCCTTCTGGGACTCTTCCAGAAACCCTAGATATGACTGAAACTTTAGGCACCACCATGAGAAGGAAAAACCACCTGATTTTAATCCCCAGACGTTATTATAGTTAG 1515 0.4634 MDLDSFFSSVNVAAVFLITAISLLFLKIVLKATWRSCSQKLPPGPWRLPVIGSVHHLAGALPHHGFRELSTKYGAVMWLQLGETPTVVVSSAEAAKEVLRTHDVIFAQRPHLPAADVVLYGSTNITFSPVGDHWKLLRKICSLEMVNAKRVRSFQPLREKVVSSLMTQLSEQARSSSLVNLSEKIYTTIFDITSKAAFGENYKSRDELFFISEIMLKSSESRSICDIFPSQNWLAVISGMKGKWETMHRMADTVLEKITSGVGATSSKVVGGEADCLLSALLNAKEDGSLTSDNVKAVMLDMILGGTETSSTIIEWAMAELLRNPRLMKKTQAEIRQVVSDNKGCIDETTLENLRYLKAVIKETLRLHPPAPFLIPRECTQTCEINGYTIPVGTQVLVNVWAIGRDPDYWSLAEEFLPDRFLNLAIDYKGFNFEYLPFGSGKRICPGMLFGVASVEIVLAHLLCRFDWELPSGTLPETLDMTETLGTTMRRKNHLILIPRRYYS 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral960g00080 504 Pfam Cytochrome P450 42 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral960g00080 504 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral960g00080 504 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral960g00080 504 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral960g00080 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Pral960g00080 504 CDD CYP71-like 72 495 - -
Pral960g00080 504 SUPERFAMILY Cytochrome P450 42 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral960g00080 504 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral960g00080 504 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral960g00080 504 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral960g00080 504 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral960g00080 504 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral960g00080 504 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral960g00080 504 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral960g00080 504 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral960g00080 504 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral960g00080 504 Gene3D Cytochrome P450 30 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral960g00080 504 PANTHER CYTOCHROME P450 71B11-RELATED 26 500 - -
Pral960g00080 504 FunFam Cytochrome P450 99A2 31 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral960g00080 Pral-Chr960 496301 498470 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral960g00080 39 502 Cytochrome P450 AT3G26330 44.654 4.66e-134 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral960g00080 - K23807 tcc:18593317 498.049