Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral960g00070 ATGGAAACTTCACCAAAACATGGCTATGGGTCTGGAAGGTTCTATGTTGAGCACCAAGGCTATCACTCATCTGATAACACCAGCCAAGCAACAACTTACTCTTCAGTTCAAACTTTGGAACAACATTACACCCTAGAATCTTCCTCAAGGACAAACAGTTTTCCAAACCATAATAATTCTCCATCTTCTGCCAATTTCTCACCTCATGACAGCCCCGCGTCACAGCTGGAGTCAAATTCTTATGCGCTAATGCCCCAGCAGTCACTTGAAATCATCAGTGGCTCCCTAGAGGATGAATCTTGCTTGACAAATGACCTTGATGACCTGAGCCATGTGATAAGAGAGTTAGAAACTGCTATGCGGGGAACTGATACAGAAATTCTGGGGATGTATGACACTGTAGTTCCTATGGAATCTAATCGGATTTTGTCAGAGGCAGAGAAGTGGAAACTAACAATGGACGTAGCATCTAGAGGGGATTTGAAAGAGATGCTTTTTGCTTGTGCGAAAGCGATGGATGCAAATGATATAGAGATAACTGAATATCTGATGTCTGAGATGCGAAAAATGGTGTCCATTTCAGGCAACCCAGTCCAACGGATAGGAGCTTATATGTTGGAATCTCTTGTGGCGAGGATGGCCTGTTCTGGAAGTGCAATCTACAAGGCCTTAAAATGCAAGGAGCCTACTGGTAACGAACTCCTTTCCTACATGCACTTGCTGTTTGAAATCTGCCCATACTTCAAGTTTGGCTATTTGTCAGCAAACGGGGCGATTGCCGAAGCCATGAAGGAAGAAAATAGAGTCCATATTATTGATTTTCAGATTAACCAGGGGAGCCAGTGGATAAGCCTAATTCAGGCTCTTGCTGGACGACCAGGTGGGCCGCCAGCACTCAGAATAACTGGCTTTGACGACTCCTTTTCAAATTTTGCTCGTGGAGGGGGCCTCGATATTGTGGGGAAAAGACTAACAAGACTTGCACAATCGTGTCAGGTTCCCTTTGAGTTCCATGCTGCTGGTGTTGCTCCTTCAAAGGTGCAACTCGAAGACCTTAAGCTTCAACCTGGCGAAGCTGTTGCTGTAAATTTTGCCATGATGCTTCACCATGTACCGGACGAGACTGTGGACAGTCACAATCCTCGTGAACGGTTGTTGAGATTGGCAAAGCACATCTGCCCCAAAGTAGTGACTCTGGTGGAGCAGGAATCCAACACCAACCGGGTCCCGTTCTTCCCCCGTTTTGCTGAGACACTGGACTATTACTTGCCTGTTTTTGAGTCAATTGATGTAGTTCTGCCAAGGGAGCACAAGGAGAGGATCAATGTGGAACAACACTGTCTGGCTCGAGAACTCGTCAACTTAGTAGCATGTGAAGGGGCAGAAAGGGTGGAACGCCATGAGCCTTTGAGAACGTGGAGGTCGCGCTTTGCCATGGCTGGATTTAAGCCATATCCATTGAGCTCCTTCGTGAATTCTACCATCAAGAATCTACTGGAGAACTACTGCGGAAATTATACTCTAGAAGAAAGAGACGGTGCACTATACCTTGGTTGGATGAATCGACCTCTTGTTGCCTCTTGTGCTTGGAGGTGA 1596 0.4624 METSPKHGYGSGRFYVEHQGYHSSDNTSQATTYSSVQTLEQHYTLESSSRTNSFPNHNNSPSSANFSPHDSPASQLESNSYALMPQQSLEIISGSLEDESCLTNDLDDLSHVIRELETAMRGTDTEILGMYDTVVPMESNRILSEAEKWKLTMDVASRGDLKEMLFACAKAMDANDIEITEYLMSEMRKMVSISGNPVQRIGAYMLESLVARMACSGSAIYKALKCKEPTGNELLSYMHLLFEICPYFKFGYLSANGAIAEAMKEENRVHIIDFQINQGSQWISLIQALAGRPGGPPALRITGFDDSFSNFARGGGLDIVGKRLTRLAQSCQVPFEFHAAGVAPSKVQLEDLKLQPGEAVAVNFAMMLHHVPDETVDSHNPRERLLRLAKHICPKVVTLVEQESNTNRVPFFPRFAETLDYYLPVFESIDVVLPREHKERINVEQHCLARELVNLVACEGAERVERHEPLRTWRSRFAMAGFKPYPLSSFVNSTIKNLLENYCGNYTLEERDGALYLGWMNRPLVASCAWR 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral960g00070 531 Pfam GRAS domain family 161 531 IPR005202 -
Pral960g00070 531 MobiDBLite consensus disorder prediction 43 76 - -
Pral960g00070 531 ProSiteProfiles GRAS family profile. 152 531 IPR005202 -
Pral960g00070 531 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 95 525 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral960g00070 Pral-Chr960 413836 416861 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral960g00070 1 531 GRAS Transcription Factor Family AT1G50600 56.797 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral960g00070 GRAS 3.2e-129 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral960g00070 - - gmx:100785400 735.717