Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral960g00069 ATGTTGTTCTATGTTGAGCACCAAGGCTATCACTCATCTGATAACACCAGCCAAGCAACAACTTACTCTTCAGTTCAAACTTTGGAACAACATTACACCCTAGAATCTTCCTCAAGGACAAACAGTTTTCCAAACCATAATAATTCTCCATCTTCTGCCAATTTCTCACCTCATGACAGCCCCGCGTCACAGCTGGAGTCAAATTCTTATGCGCTAATGCCCCAGCAGTCACTTGAAATCATCAGTGGCTCCCTAGAGGATGAATCTTGCTTGACAAATGACCTTGATGACCTGAGCCATGTGATAAGAGAGTTAGAAACTGCTATGCGGGGAACTGATACAGAAATTCTGGGGATGTATGACACTGTAGTTCCTATGGAATCTAATCGGATTTTGTCAGAGGCAGAGAAGTGGAAACTAACAATGGACGTAGCATCTAGAGGGGATTTGAAAGAGATGCTTTTTGCTTGTGCGAAAGCGATGGATGCAAATGATATAGAGATAACTGAATATCTGATGTCTGAGATGCGAAAAATGGTGTCCATTTCAGGCAACCCAGTCCAACGGATAGGAGCTTATATGTTGGAATCTCTTGTGGCGAGGATGGCCTGTTCTGGAAGTGCAATCTACAAGGCCTTAAAATGCAAGGAGCCTACTGGTAACGAACTCCTTTCCTACATGCACTTGCTGTTTGAAATCTGCCCATACTTCAAGTTTGGCTATTTGTCAGCAAACGGGGCGATTGCCGAAGCCATGAAGGAAGAAAATAGAGTCCATATTATTGATTTTCAGATTAACCAGGGGAGCCAGTGGATAAGCCTAATTCAGGCTCTTGCTGGACGACCAGGTGGGCCGCCAGCACTCAGAATAACTGGCTTTGACGACTCCTTTTCAAATTTTGCTCGTGGAGGGGGCCTCGATATTGTGGGGAAAAGACTAACAAGACTTGCACAATCGTGTCAGGTTCCCTTTGAGTTCCATGCTGCTGGTGTTGCTCCTTCAAAGGTGCAACTCGAAGACCTTAAGCTTCAACCTGGCGAAGCTGTTGCTGTAAATTTTGCCATGATGCTTCACCATGTACCGGACGAGACTGTGGACAGTCACAATCCTCGTGAACGGTTGTTGAGATTGGCAAAGCACATCTGCCCCAAAGTAGTGACTCTGGTGGAGCAGGAATCCAACACCAACCGGGTCCCGTTCTTCCCCCGTTTTGCTGAGACACTGGACTATTACTTGCCTGTTTTTGAGTCAATTGATGTAGTTCTGCCAAGGGAGCACAAGGAGAGGATCAATGTGGAACAACACTGTCTGGCTCGAGAACTCGTCAACTTAGTAGCATGTGAAGGGGCAGAAAGGGTGGAACGCCATGAGCCTTTGAGAACGTGGAGGTCGCGCTTTGCCATGGCTGGATTTAAGCCATATCCATTGAGCTCCTTCGTGAATTCTACCATCAAGAATCTACTGGAGAACTACTGCGGAAATTATACTCTAGAAGAAAGAGACGGTGCACTATACCTTGGTTGGATGAATCGACCTCTTGTTGCCTCTTGTGCTTGGAGGTGA 1563 0.4619 MLFYVEHQGYHSSDNTSQATTYSSVQTLEQHYTLESSSRTNSFPNHNNSPSSANFSPHDSPASQLESNSYALMPQQSLEIISGSLEDESCLTNDLDDLSHVIRELETAMRGTDTEILGMYDTVVPMESNRILSEAEKWKLTMDVASRGDLKEMLFACAKAMDANDIEITEYLMSEMRKMVSISGNPVQRIGAYMLESLVARMACSGSAIYKALKCKEPTGNELLSYMHLLFEICPYFKFGYLSANGAIAEAMKEENRVHIIDFQINQGSQWISLIQALAGRPGGPPALRITGFDDSFSNFARGGGLDIVGKRLTRLAQSCQVPFEFHAAGVAPSKVQLEDLKLQPGEAVAVNFAMMLHHVPDETVDSHNPRERLLRLAKHICPKVVTLVEQESNTNRVPFFPRFAETLDYYLPVFESIDVVLPREHKERINVEQHCLARELVNLVACEGAERVERHEPLRTWRSRFAMAGFKPYPLSSFVNSTIKNLLENYCGNYTLEERDGALYLGWMNRPLVASCAWR 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral960g00069 520 ProSiteProfiles GRAS family profile. 141 520 IPR005202 -
Pral960g00069 520 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 86 514 IPR005202 -
Pral960g00069 520 MobiDBLite consensus disorder prediction 33 65 - -
Pral960g00069 520 Pfam GRAS domain family 150 520 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral960g00069 Pral-Chr960 413836 420087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral960g00069 10 520 GRAS Transcription Factor Family AT1G50600 57.864 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral960g00069 GRAS 3e-129 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral960g00069 - - gmx:100785400 726.087